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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
744.8
nTPM
Monaco:
786.7
nTPM
Schmiedel:
443.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
744.8
HPA sample
nTPM
gdT-cell nTPM: 645.2
Samples: 6
Max nTPM: 736.8
Min nTPM: 541.3
P10809_1007
541.3
P10809_1022
732.5
P10809_1041
736.8
P10809_1060
622.2
P10809_1077
675.4
P10809_1098
563.0
MAIT T-cell nTPM: 549.3
Samples: 6
Max nTPM: 660.9
Min nTPM: 419.1
P10809_1006
419.1
P10809_1024
660.9
P10809_1043
533.0
P10809_1062
528.1
P10809_1083
612.6
P10809_1097
542.2
Memory CD4 T-cell nTPM: 621.2
Samples: 6
Max nTPM: 678.1
Min nTPM: 518.5
P10809_1014
518.5
P10809_1026
656.7
P10809_1045
624.3
P10809_1064
657.0
P10809_1086
678.1
P10809_1113
592.5
Memory CD8 T-cell nTPM: 701.6
Samples: 5
Max nTPM: 804.4
Min nTPM: 571.7
P10809_1012
571.7
P10809_1027
804.4
P10809_1046
731.0
P10809_1065
730.2
P10809_1111
670.5
Naive CD4 T-cell nTPM: 502.7
Samples: 6
Max nTPM: 532.0
Min nTPM: 445.6
P10809_1015
445.6
P10809_1030
530.2
P10809_1049
506.2
P10809_1068
532.0
P10809_1085
513.3
P10809_1112
488.7
Naive CD8 T-cell nTPM: 584.2
Samples: 6
Max nTPM: 734.1
Min nTPM: 451.9
P10809_1016
451.9
P10809_1031
648.1
P10809_1050
586.0
P10809_1069
625.5
P10809_1087
734.1
P10809_1110
459.8
T-reg nTPM: 744.8
Samples: 6
Max nTPM: 853.5
Min nTPM: 601.3
P10809_1018
601.3
P10809_1037
853.5
P10809_1056
710.4
P10809_1075
688.0
P10809_1094
813.3
P10809_1106
802.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
786.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 416.1
Samples: 4
Max nTPM: 649.8
Min nTPM: 250.6
RHH5202_R3573
453.8
RHH5230_R3602
250.6
RHH5259_R3631
310.3
RHH5288_R3660
649.8
Effector memory CD8 T-cell nTPM: 457.1
Samples: 4
Max nTPM: 528.5
Min nTPM: 389.1
RHH5203_R3574
528.5
RHH5231_R3603
502.8
RHH5260_R3632
389.1
RHH5289_R3661
408.1
MAIT T-cell nTPM: 407.2
Samples: 4
Max nTPM: 581.5
Min nTPM: 276.8
RHH5233_R3605
428.0
RHH5205_R3576
276.8
RHH5262_R3634
342.5
RHH5297_R3663
581.5
Memory CD4 T-cell TFH nTPM: 558.2
Samples: 4
Max nTPM: 692.3
Min nTPM: 433.6
RHH5300_R3666
531.9
RHH5236_R3608
692.3
RHH5265_R3637
433.6
RHH5208_R3579
574.9
Memory CD4 T-cell Th1 nTPM: 506.5
Samples: 4
Max nTPM: 870.0
Min nTPM: 357.7
RHH5210_R3581
433.1
RHH5302_R3668
870.0
RHH5238_R3610
357.7
RHH5267_R3639
365.2
Memory CD4 T-cell Th1/Th17 nTPM: 472.2
Samples: 4
Max nTPM: 728.3
Min nTPM: 238.9
RHH5303_R3669
728.3
RHH5211_R3582
539.9
RHH5239_R3611
238.9
RHH5268_R3640
381.8
Memory CD4 T-cell Th17 nTPM: 360.0
Samples: 4
Max nTPM: 578.5
Min nTPM: 232.4
RHH5304_R3670
349.4
RHH5212_R3583
578.5
RHH5240_R3612
232.4
RHH5269_R3641
279.5
Memory CD4 T-cell Th2 nTPM: 482.7
Samples: 4
Max nTPM: 595.0
Min nTPM: 387.5
RHH5305_R3671
501.7
RHH5213_R3584
446.6
RHH5241_R3613
595.0
RHH5270_R3642
387.5
Naive CD4 T-cell nTPM: 374.3
Samples: 4
Max nTPM: 512.7
Min nTPM: 297.8
RHH5306_R3672
380.4
RHH5214_R3585
512.7
RHH5242_R3614
297.8
RHH5271_R3643
306.1
Naive CD8 T-cell nTPM: 281.2
Samples: 4
Max nTPM: 380.7
Min nTPM: 158.2
RHH5201_R3572
334.3
RHH5229_R3601
158.2
RHH5258_R3630
380.7
RHH5287_R3659
251.5
Non-Vd2 gdTCR nTPM: 630.3
Samples: 4
Max nTPM: 983.8
Min nTPM: 350.0
RHH5235_R3607
350.0
RHH5264_R3636
667.7
RHH5207_R3578
519.5
RHH5299_R3665
983.8
T-reg nTPM: 434.5
Samples: 4
Max nTPM: 596.9
Min nTPM: 286.3
RHH5301_R3667
596.9
RHH5237_R3609
488.4
RHH5266_R3638
286.3
RHH5209_R3580
366.5
Terminal effector memory CD4 T-cell nTPM: 536.6
Samples: 2
Max nTPM: 710.1
Min nTPM: 363.0
RHH5243_R3615
363.0
RHH5272_R3644
710.1
Terminal effector memory CD8 T-cell nTPM: 786.7
Samples: 4
Max nTPM: 1207.6
Min nTPM: 460.8
RHH5232_R3604
625.0
RHH5204_R3575
1207.6
RHH5261_R3633
460.8
RHH5296_R3662
853.5
Vd2 gdTCR nTPM: 595.5
Samples: 4
Max nTPM: 866.4
Min nTPM: 314.3
RHH5234_R3606
376.5
RHH5206_R3577
866.4
RHH5263_R3635
314.3
RHH5298_R3664
824.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.