MCEE

COLON - Expression summary

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RNA expression

HPA:15.6 FPKM
GTEx:5.9 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA035196

 

Endothelial cells

Not detected  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

15.6

overview Male, age 54
Sample 1
FPKM: 26.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 15.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 15.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.7
Samples: 149

Max RPKM: 8.8
Min RPKM: 2.8
Std RPKM: 1.2
Median RPKM: 5.4
GTEX-14E6C-2226-SM-5QGQG 8.8
GTEX-14C5O-2626-SM-5RQI5 8.7
GTEX-1477Z-2126-SM-5Q5CM 8.4
GTEX-13CF2-1826-SM-5N9GK 8.1
GTEX-13OW8-2726-SM-5L3FZ 8.0
GTEX-ZAB4-2426-SM-5HL8A 7.9
GTEX-13G51-2126-SM-5IJD9 7.7
GTEX-148VJ-2426-SM-5NQ9Y 7.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.1
Samples: 196

Max RPKM: 11
Min RPKM: 1.7
Std RPKM: 1.3
Median RPKM: 5.9
GTEX-13O3O-2526-SM-5L3DR 11.0
GTEX-ZAB4-2226-SM-5HL97 10.2
GTEX-Y8LW-1226-SM-4WWDP 9.1
GTEX-13FHP-2426-SM-5KLZ5 9.1
GTEX-13OW6-2126-SM-5N9GL 8.9
GTEX-11TTK-2426-SM-5PNYO 8.9
GTEX-13O21-2426-SM-5MR4A 8.8
GTEX-139TS-1926-SM-5IJFO 8.7
Show all