PACSIN1

GENERAL INFORMATION

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Gene name

PACSIN1

Gene description

Protein kinase C and casein kinase substrate in neurons 1

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enriched (cerebral cortex)
GTEx:Group enriched (cerebellum, cerebral cortex, hippocampus)

Protein evidence

Evidence at protein level

Protein localization

Distinct cytoplasmic expression in CNS and peripheral nerves.

ANTIBODY RELIABILITY

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Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Data reliability

Supportive based on 3 antibodies.
HPA028852 , HPA055491 , CAB009929
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Duodenum

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enriched (cerebral cortex)

Organ

Expression

GTEx dataset
RNA tissue category:  Group enriched (cerebellum, cerebral cortex, hippocampus)

Organ

Expression



GENE INFORMATION

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Gene name

PACSIN1 (HGNC Symbol)

Synonyms

SDPI

Description

Protein kinase C and casein kinase substrate in neurons 1 (HGNC Symbol)

Entrez gene summary

Chromosome

6

Cytoband

p21.31

Chromosome location (bp)

34466061 - 34535231

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000124507 (version 78.38)

Entrez gene

29993

UniProt

Q9BY11 (UniProt - Evidence at protein level)

neXtProt

NX_Q9BY11

Antibodypedia

PACSIN1 antibodies


PROTEIN BROWSER

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ENST00000244458
 
ENST00000374043
 
ENST00000538621
 
ENST00000620693
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PACSIN1-001 ENSP00000244458
ENST00000244458
Q9BY11
Show all »
Show » Show » 444 51 No 0
PACSIN1-003 ENSP00000363155
ENST00000374043
F6U236
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Show » Show » 402 46.1 No 0
PACSIN1-201 ENSP00000439639
ENST00000538621
Q9BY11
Show all »
Show » Show » 444 51 No 0
PACSIN1-202 ENSP00000484060
ENST00000620693
Q9BY11
Show all »
Show » Show » 444 51 No 0