SOX9

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.6 FPKM
GTEx:5.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not available
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA001758

 

Antibody CAB022456

 

Antibody CAB068240

 

Endothelial cells

Not available   Not available   Not available  

Glandular cells

Medium   High   High  

Peripheral nerve/ganglion

Not available   Not available   Not available  
     
     

COLON - HPA RNA-seq

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Average FPKM

16.6

overview Male, age 54
Sample 1
FPKM: 25.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 22.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 8.9
Min RPKM: 0
Std RPKM: 1.1
Median RPKM: 0.3
GTEX-YJ8A-1726-SM-5P9IQ 8.9
GTEX-XBED-1726-SM-47JYO 6.7
GTEX-13X6I-2726-SM-5Q5ET 5.9
GTEX-11ONC-1926-SM-5GU75 5.6
GTEX-Y5LM-1426-SM-5RQJL 4.5
GTEX-V955-1726-SM-4JBHF 3.1
GTEX-12ZZW-2426-SM-5DUWE 2.9
GTEX-11EQ9-1526-SM-5PNY7 2.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.0
Samples: 196

Max RPKM: 58.9
Min RPKM: 0.1
Std RPKM: 8.5
Median RPKM: 9.7
GTEX-117YW-1826-SM-5PNY5 58.9
GTEX-PWN1-1426-SM-48TDF 34.3
GTEX-13S86-1626-SM-5Q5C5 30.0
GTEX-UJHI-1126-SM-4IHLN 27.4
GTEX-11P82-1026-SM-5BC5J 27.2
GTEX-T5JW-1126-SM-4DM5V 26.6
GTEX-111CU-1426-SM-5GZYP 26.6
GTEX-145MN-1726-SM-5SIA6 25.2
Show all