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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
194.5
nTPM
Monaco:
243.0
nTPM
Schmiedel:
143.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
194.5
HPA sample
nTPM
gdT-cell nTPM: 126.0
Samples: 6
Max nTPM: 153.8
Min nTPM: 88.1
P10809_1007
88.1
P10809_1022
140.3
P10809_1041
132.5
P10809_1060
127.3
P10809_1077
114.0
P10809_1098
153.8
MAIT T-cell nTPM: 140.4
Samples: 6
Max nTPM: 172.5
Min nTPM: 106.6
P10809_1006
106.6
P10809_1024
132.7
P10809_1043
142.6
P10809_1062
147.9
P10809_1083
140.1
P10809_1097
172.5
Memory CD4 T-cell nTPM: 148.0
Samples: 6
Max nTPM: 170.2
Min nTPM: 103.4
P10809_1014
103.4
P10809_1026
167.1
P10809_1045
151.8
P10809_1064
128.6
P10809_1086
166.6
P10809_1113
170.2
Memory CD8 T-cell nTPM: 130.5
Samples: 5
Max nTPM: 145.8
Min nTPM: 91.3
P10809_1012
91.3
P10809_1027
134.8
P10809_1046
138.1
P10809_1065
142.7
P10809_1111
145.8
Naive CD4 T-cell nTPM: 151.5
Samples: 6
Max nTPM: 175.8
Min nTPM: 110.4
P10809_1015
110.4
P10809_1030
150.3
P10809_1049
145.2
P10809_1068
159.1
P10809_1085
175.8
P10809_1112
168.4
Naive CD8 T-cell nTPM: 128.3
Samples: 6
Max nTPM: 160.8
Min nTPM: 94.2
P10809_1016
94.2
P10809_1031
104.4
P10809_1050
123.1
P10809_1069
160.8
P10809_1087
144.3
P10809_1110
143.1
T-reg nTPM: 194.5
Samples: 6
Max nTPM: 239.5
Min nTPM: 127.8
P10809_1018
127.8
P10809_1037
183.2
P10809_1056
205.3
P10809_1075
210.9
P10809_1094
200.2
P10809_1106
239.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 190.7
Samples: 4
Max nTPM: 217.4
Min nTPM: 172.2
RHH5202_R3573
217.4
RHH5230_R3602
178.1
RHH5259_R3631
172.2
RHH5288_R3660
195.0
Effector memory CD8 T-cell nTPM: 190.7
Samples: 4
Max nTPM: 215.3
Min nTPM: 159.8
RHH5203_R3574
215.3
RHH5231_R3603
159.8
RHH5260_R3632
191.6
RHH5289_R3661
196.1
MAIT T-cell nTPM: 189.2
Samples: 4
Max nTPM: 208.2
Min nTPM: 152.4
RHH5233_R3605
208.2
RHH5205_R3576
190.6
RHH5262_R3634
205.7
RHH5297_R3663
152.4
Memory CD4 T-cell TFH nTPM: 222.1
Samples: 4
Max nTPM: 244.3
Min nTPM: 209.4
RHH5300_R3666
215.9
RHH5236_R3608
244.3
RHH5265_R3637
209.4
RHH5208_R3579
218.7
Memory CD4 T-cell Th1 nTPM: 205.0
Samples: 4
Max nTPM: 225.5
Min nTPM: 163.8
RHH5210_R3581
223.9
RHH5302_R3668
206.7
RHH5238_R3610
163.8
RHH5267_R3639
225.5
Memory CD4 T-cell Th1/Th17 nTPM: 208.8
Samples: 4
Max nTPM: 234.0
Min nTPM: 153.5
RHH5303_R3669
224.1
RHH5211_R3582
234.0
RHH5239_R3611
153.5
RHH5268_R3640
223.4
Memory CD4 T-cell Th17 nTPM: 207.7
Samples: 4
Max nTPM: 221.7
Min nTPM: 193.8
RHH5304_R3670
193.8
RHH5212_R3583
206.7
RHH5240_R3612
221.7
RHH5269_R3641
208.7
Memory CD4 T-cell Th2 nTPM: 220.2
Samples: 4
Max nTPM: 241.9
Min nTPM: 188.3
RHH5305_R3671
188.3
RHH5213_R3584
225.8
RHH5241_R3613
241.9
RHH5270_R3642
224.9
Naive CD4 T-cell nTPM: 242.8
Samples: 4
Max nTPM: 286.4
Min nTPM: 215.3
RHH5306_R3672
228.6
RHH5214_R3585
240.7
RHH5242_R3614
215.3
RHH5271_R3643
286.4
Naive CD8 T-cell nTPM: 229.5
Samples: 4
Max nTPM: 308.8
Min nTPM: 170.4
RHH5201_R3572
308.8
RHH5229_R3601
170.4
RHH5258_R3630
229.5
RHH5287_R3659
209.1
Non-Vd2 gdTCR nTPM: 162.7
Samples: 4
Max nTPM: 190.1
Min nTPM: 121.3
RHH5235_R3607
156.5
RHH5264_R3636
182.8
RHH5207_R3578
190.1
RHH5299_R3665
121.3
T-reg nTPM: 243.0
Samples: 4
Max nTPM: 255.0
Min nTPM: 219.6
RHH5301_R3667
219.6
RHH5237_R3609
253.6
RHH5266_R3638
243.7
RHH5209_R3580
255.0
Terminal effector memory CD4 T-cell nTPM: 160.9
Samples: 2
Max nTPM: 174.5
Min nTPM: 147.3
RHH5243_R3615
147.3
RHH5272_R3644
174.5
Terminal effector memory CD8 T-cell nTPM: 169.7
Samples: 4
Max nTPM: 186.6
Min nTPM: 153.7
RHH5232_R3604
173.1
RHH5204_R3575
186.6
RHH5261_R3633
165.3
RHH5296_R3662
153.7
Vd2 gdTCR nTPM: 179.8
Samples: 4
Max nTPM: 220.4
Min nTPM: 128.6
RHH5234_R3606
176.3
RHH5206_R3577
194.0
RHH5263_R3635
220.4
RHH5298_R3664
128.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.