IRF3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.3 FPKM
GTEx:35.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA004895

 

Antibody CAB013018

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

13.3

overview Male, age 54
Sample 1
FPKM: 11.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

35.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 30.8
Samples: 149

Max RPKM: 56.2
Min RPKM: 13.7
Std RPKM: 9.6
Median RPKM: 28.4
GTEX-1477Z-2126-SM-5Q5CM 56.2
GTEX-13X6K-2726-SM-5O9DG 55.6
GTEX-13X6I-2726-SM-5Q5ET 53.4
GTEX-13OW6-2226-SM-5N9FL 51.2
GTEX-ZAJG-2626-SM-5S2NU 50.8
GTEX-V955-1726-SM-4JBHF 49.8
GTEX-145LS-2926-SM-5O99G 48.3
GTEX-13OW5-2826-SM-5KM1G 48.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 39.1
Samples: 196

Max RPKM: 69.8
Min RPKM: 15.3
Std RPKM: 10.5
Median RPKM: 39.5
GTEX-XV7Q-2126-SM-4BRVX 69.8
GTEX-147JS-2526-SM-5S2Q8 63.7
GTEX-1399R-2226-SM-5P9JB 63.7
GTEX-13OVJ-1726-SM-5IJDZ 61.5
GTEX-131XE-0826-SM-5HL9W 61.3
GTEX-139TS-1926-SM-5IJFO 60.9
GTEX-ZAB4-2226-SM-5HL97 60.1
GTEX-Q734-1126-SM-48TZY 58.1
Show all