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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.4
nTPM
Monaco:
472.4
nTPM
Schmiedel:
317.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.4
HPA sample
nTPM
gdT-cell nTPM: 114.4
Samples: 6
Max nTPM: 150.3
Min nTPM: 90.5
P10809_1007
90.5
P10809_1022
150.3
P10809_1041
114.4
P10809_1060
109.2
P10809_1077
99.2
P10809_1098
122.7
MAIT T-cell nTPM: 90.6
Samples: 6
Max nTPM: 109.1
Min nTPM: 74.5
P10809_1006
83.9
P10809_1024
109.1
P10809_1043
88.7
P10809_1062
100.4
P10809_1083
74.5
P10809_1097
87.0
Memory CD4 T-cell nTPM: 78.8
Samples: 6
Max nTPM: 88.0
Min nTPM: 66.2
P10809_1014
66.2
P10809_1026
83.6
P10809_1045
81.9
P10809_1064
78.6
P10809_1086
74.4
P10809_1113
88.0
Memory CD8 T-cell nTPM: 87.4
Samples: 5
Max nTPM: 99.4
Min nTPM: 79.5
P10809_1012
79.5
P10809_1027
85.9
P10809_1046
91.9
P10809_1065
80.1
P10809_1111
99.4
Naive CD4 T-cell nTPM: 83.5
Samples: 6
Max nTPM: 103.7
Min nTPM: 47.9
P10809_1015
70.8
P10809_1030
83.7
P10809_1049
47.9
P10809_1068
103.7
P10809_1085
91.8
P10809_1112
103.0
Naive CD8 T-cell nTPM: 87.3
Samples: 6
Max nTPM: 102.8
Min nTPM: 76.9
P10809_1016
83.7
P10809_1031
76.9
P10809_1050
88.5
P10809_1069
88.5
P10809_1087
83.6
P10809_1110
102.8
T-reg nTPM: 96.0
Samples: 6
Max nTPM: 128.2
Min nTPM: 69.2
P10809_1018
69.2
P10809_1037
84.1
P10809_1056
80.6
P10809_1075
88.7
P10809_1094
125.4
P10809_1106
128.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
472.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 363.8
Samples: 4
Max nTPM: 459.4
Min nTPM: 331.3
RHH5202_R3573
459.4
RHH5230_R3602
333.0
RHH5259_R3631
331.3
RHH5288_R3660
331.5
Effector memory CD8 T-cell nTPM: 382.5
Samples: 4
Max nTPM: 411.5
Min nTPM: 337.1
RHH5203_R3574
411.5
RHH5231_R3603
410.1
RHH5260_R3632
371.4
RHH5289_R3661
337.1
MAIT T-cell nTPM: 368.9
Samples: 4
Max nTPM: 441.1
Min nTPM: 295.2
RHH5233_R3605
383.4
RHH5205_R3576
441.1
RHH5262_R3634
295.2
RHH5297_R3663
355.8
Memory CD4 T-cell TFH nTPM: 379.5
Samples: 4
Max nTPM: 437.8
Min nTPM: 348.4
RHH5300_R3666
368.5
RHH5236_R3608
348.4
RHH5265_R3637
363.1
RHH5208_R3579
437.8
Memory CD4 T-cell Th1 nTPM: 358.9
Samples: 4
Max nTPM: 409.5
Min nTPM: 332.2
RHH5210_R3581
409.5
RHH5302_R3668
359.6
RHH5238_R3610
332.2
RHH5267_R3639
334.2
Memory CD4 T-cell Th1/Th17 nTPM: 365.7
Samples: 4
Max nTPM: 470.9
Min nTPM: 250.4
RHH5303_R3669
353.3
RHH5211_R3582
388.3
RHH5239_R3611
470.9
RHH5268_R3640
250.4
Memory CD4 T-cell Th17 nTPM: 382.4
Samples: 4
Max nTPM: 451.4
Min nTPM: 311.6
RHH5304_R3670
378.5
RHH5212_R3583
311.6
RHH5240_R3612
451.4
RHH5269_R3641
388.0
Memory CD4 T-cell Th2 nTPM: 364.4
Samples: 4
Max nTPM: 386.3
Min nTPM: 336.1
RHH5305_R3671
381.2
RHH5213_R3584
386.3
RHH5241_R3613
354.0
RHH5270_R3642
336.1
Naive CD4 T-cell nTPM: 378.2
Samples: 4
Max nTPM: 426.2
Min nTPM: 343.7
RHH5306_R3672
358.9
RHH5214_R3585
343.7
RHH5242_R3614
426.2
RHH5271_R3643
384.1
Naive CD8 T-cell nTPM: 402.1
Samples: 4
Max nTPM: 486.5
Min nTPM: 334.1
RHH5201_R3572
410.2
RHH5229_R3601
486.5
RHH5258_R3630
334.1
RHH5287_R3659
377.6
Non-Vd2 gdTCR nTPM: 469.3
Samples: 4
Max nTPM: 598.1
Min nTPM: 383.1
RHH5235_R3607
492.1
RHH5264_R3636
383.1
RHH5207_R3578
598.1
RHH5299_R3665
403.7
T-reg nTPM: 392.1
Samples: 4
Max nTPM: 419.6
Min nTPM: 356.0
RHH5301_R3667
419.6
RHH5237_R3609
405.0
RHH5266_R3638
356.0
RHH5209_R3580
387.7
Terminal effector memory CD4 T-cell nTPM: 302.5
Samples: 2
Max nTPM: 327.9
Min nTPM: 277.0
RHH5243_R3615
277.0
RHH5272_R3644
327.9
Terminal effector memory CD8 T-cell nTPM: 472.4
Samples: 4
Max nTPM: 575.0
Min nTPM: 410.0
RHH5232_R3604
575.0
RHH5204_R3575
456.2
RHH5261_R3633
410.0
RHH5296_R3662
448.4
Vd2 gdTCR nTPM: 393.4
Samples: 4
Max nTPM: 499.4
Min nTPM: 308.0
RHH5234_R3606
320.6
RHH5206_R3577
499.4
RHH5263_R3635
445.5
RHH5298_R3664
308.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.