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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
432.3
nTPM
HPA Brain:
400.4
nTPM
GTEx:
432.3
nTPM
FANTOM5:
447.7
Scaled Tags Per Million
Pig:
321.7
nTPM
Mouse:
4.8
nTPM
Allen mouse:
0.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
400.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 302.3
1833
Male, age 53, unknown
422.0
1830
Male, age 51, unknown
407.8
2411
Female, age 72, unknown
395.9
1870
Female, age 42, unknown
371.5
2019
Male, age 18, unknown
333.0
2219
Male, age 76, both hemispheres
285.2
2828
Female, age 72, unknown
284.2
1827
Male, age 72, unknown
213.8
2666
Male, age 74, left hemisphere
189.5
2586
Male, age 75, left hemisphere
120.0
Dorsal raphe nucleus nTPM: 222.6
2750
Male, age 76, both hemispheres
342.9
2016
Female, age 72, unknown
260.5
1828
Male, age 53, unknown
217.7
2298
Female, age 72, unknown
165.4
2047
Male, age 72, unknown
126.5
Inferior colliculus nTPM: 224.5
2849
Male, age 72, unknown
257.2
1848
Female, age 42, unknown
239.8
1890
Male, age 53, unknown
203.8
2097
Female, age 72, unknown
197.3
Median raphe nucleus nTPM: 150.1
2220
Male, age 76, midline
150.1
Periaquaductal grey, anterior nTPM: 191.0
2502
Female, age 75, unknown
249.8
1947
Male, age 18, unknown
184.2
1795
Male, age 51, unknown
139.0
Periaquaductal grey, dorsal nTPM: 159.2
2464
Female, age 72, unknown
253.9
1831
Male, age 72, unknown
158.5
2850
Male, age 76, both hemispheres
120.7
1840
Male, age 53, unknown
103.5
Periaquaductal grey, lateral nTPM: 190.9
2272
Male, age 74, both hemispheres
257.4
2053
Male, age 18, unknown
202.5
2140
Male, age 76, both hemispheres
112.9
Pretectal area nTPM: 207.2
2316
Male, age 76, right hemisphere
335.8
1815
Male, age 53, unknown
303.0
1817
Female, age 42, unknown
246.3
2825
Male, age 18, unknown
221.1
2407
Male, age 75, both hemispheres
214.1
2273
Male, age 74, both hemispheres
196.4
2007
Male, age 72, unknown
195.9
2224
Female, age 72, unknown
177.7
2667
Female, age 75, unknown
160.9
1944
Female, age 72, unknown
118.3
1816
Male, age 51, unknown
109.5
Red nucleus nTPM: 400.4
1821
Female, age 72, unknown
545.8
1904
Male, age 53, unknown
503.6
2823
Male, age 76, right hemisphere
499.8
1865
Male, age 51, unknown
489.8
1954
Female, age 42, unknown
453.1
2503
Female, age 72, unknown
410.7
2769
Male, age 72, unknown
410.3
2227
Male, age 72, unknown
404.0
2785
Male, age 18, unknown
394.3
2725
Female, age 75, unknown
271.5
2588
Male, age 74, left hemisphere
246.2
2584
Male, age 75, left hemisphere
176.0
Substantia nigra nTPM: 216.3
2590
Female, age 75, unknown
275.3
1851
Male, age 51, unknown
271.1
2409
Female, age 72, unknown
246.9
1889
Female, age 72, unknown
245.6
2699
Male, age 18, unknown
230.1
2583
Male, age 75, right hemisphere
210.1
2241
Male, age 72, unknown
197.0
1916
Female, age 42, unknown
171.3
2665
Male, age 74, both hemispheres
165.8
1941
Male, age 53, unknown
150.0
Superior colliculus nTPM: 260.2
1995
Male, age 72, unknown
408.2
1913
Female, age 42, unknown
383.0
1895
Male, age 76, right hemisphere
378.7
2587
Male, age 74, left hemisphere
299.7
1839
Male, age 51, unknown
286.7
2668
Female, age 75, unknown
234.8
1796
Male, age 53, unknown
208.8
2261
Male, age 18, unknown
144.7
2087
Female, age 72, unknown
141.3
2664
Male, age 75, both hemispheres
116.1
Ventral tegmental area nTPM: 243.3
2410
Female, age 72, unknown
373.8
2223
Female, age 72, unknown
265.4
1915
Female, age 42, unknown
228.2
2218
Male, age 76, both hemispheres
201.5
1942
Male, age 51, unknown
199.1
2021
Male, age 53, unknown
191.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
432.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 432.3
Samples: 139
Max nTPM: 1578.6
Min nTPM: 138.1
Std nTPM: 246.3
Median nTPM: 364.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1578.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1466.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1387.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1180.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1033.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
916.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
910.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
878.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
866.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
849.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
828.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
750.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
736.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
719.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
703.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
690.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
683.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
678.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
664.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
641.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
614.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
607.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
589.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
567.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
565.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
564.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
550.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
549.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
549.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
548.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
537.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
529.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
521.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
517.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
498.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
497.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
496.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
496.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
490.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
483.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
480.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
477.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
472.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
464.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
462.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
461.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
456.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
456.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
455.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
453.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
447.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
444.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
444.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
441.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
438.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
433.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
424.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
413.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
412.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
411.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
398.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
395.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
395.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
387.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
381.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
376.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
374.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
372.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
369.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
364.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
358.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
357.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
357.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
355.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
349.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
344.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
344.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
334.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
330.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
326.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
323.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
313.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
313.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
312.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
312.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
311.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
307.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
307.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
306.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
306.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
304.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
303.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
301.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
299.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
291.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
289.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
289.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
288.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
287.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
287.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
284.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
282.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
281.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
274.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
273.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
273.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
269.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
266.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
266.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
265.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
262.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
255.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
245.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
244.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
242.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
242.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
242.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
241.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
240.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
233.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
231.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
217.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
212.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
209.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
208.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
206.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
205.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
205.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
204.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
198.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
197.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
197.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
195.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
192.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
180.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
171.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
166.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
146.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
138.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
4.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 4.8
Samples: 4
Max nTPM: 5.7
Min nTPM: 3.7
Sample A
Male
5.6
Sample B
Male
4.2
Sample C
Female
5.7
Sample D
Female
3.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.