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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
94.8
nTPM
HPA Brain:
108.1
nTPM
GTEx:
94.8
nTPM
FANTOM5:
158.9
Scaled Tags Per Million
Pig:
92.4
nTPM
Mouse:
54.0
nTPM
Allen mouse:
5.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
108.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 97.1
1870
Female, age 42, unknown
112.1
2666
Male, age 74, left hemisphere
101.8
1833
Male, age 53, unknown
101.5
2586
Male, age 75, left hemisphere
101.3
2828
Female, age 72, unknown
100.1
2019
Male, age 18, unknown
95.7
1830
Male, age 51, unknown
95.4
1827
Male, age 72, unknown
94.3
2411
Female, age 72, unknown
87.6
2219
Male, age 76, both hemispheres
81.6
Dorsal raphe nucleus nTPM: 88.4
2750
Male, age 76, both hemispheres
100.0
2298
Female, age 72, unknown
90.2
1828
Male, age 53, unknown
86.2
2016
Female, age 72, unknown
83.8
2047
Male, age 72, unknown
81.9
Inferior colliculus nTPM: 83.2
2849
Male, age 72, unknown
94.1
1848
Female, age 42, unknown
84.6
1890
Male, age 53, unknown
81.9
2097
Female, age 72, unknown
72.1
Median raphe nucleus nTPM: 91.1
2220
Male, age 76, midline
91.1
Periaquaductal grey, anterior nTPM: 86.0
2502
Female, age 75, unknown
86.2
1795
Male, age 51, unknown
86.1
1947
Male, age 18, unknown
85.7
Periaquaductal grey, dorsal nTPM: 80.8
2850
Male, age 76, both hemispheres
93.5
1831
Male, age 72, unknown
81.3
2464
Female, age 72, unknown
74.3
1840
Male, age 53, unknown
74.0
Periaquaductal grey, lateral nTPM: 83.2
2272
Male, age 74, both hemispheres
89.7
2053
Male, age 18, unknown
80.1
2140
Male, age 76, both hemispheres
79.8
Pretectal area nTPM: 89.1
1815
Male, age 53, unknown
96.7
1817
Female, age 42, unknown
96.2
2007
Male, age 72, unknown
95.3
2667
Female, age 75, unknown
95.2
2407
Male, age 75, both hemispheres
91.1
2825
Male, age 18, unknown
89.4
1816
Male, age 51, unknown
86.7
2316
Male, age 76, right hemisphere
84.7
1944
Female, age 72, unknown
82.4
2224
Female, age 72, unknown
82.0
2273
Male, age 74, both hemispheres
80.0
Red nucleus nTPM: 108.1
1865
Male, age 51, unknown
122.9
1904
Male, age 53, unknown
115.9
2725
Female, age 75, unknown
112.3
2769
Male, age 72, unknown
110.0
2785
Male, age 18, unknown
109.5
2227
Male, age 72, unknown
109.0
2823
Male, age 76, right hemisphere
107.0
2584
Male, age 75, left hemisphere
106.3
1821
Female, age 72, unknown
105.5
2503
Female, age 72, unknown
102.4
1954
Female, age 42, unknown
100.0
2588
Male, age 74, left hemisphere
96.7
Substantia nigra nTPM: 86.5
2665
Male, age 74, both hemispheres
97.3
1889
Female, age 72, unknown
94.2
2699
Male, age 18, unknown
93.2
1851
Male, age 51, unknown
90.1
1916
Female, age 42, unknown
89.0
2590
Female, age 75, unknown
86.6
2409
Female, age 72, unknown
84.1
2583
Male, age 75, right hemisphere
83.2
1941
Male, age 53, unknown
80.5
2241
Male, age 72, unknown
66.4
Superior colliculus nTPM: 94.0
1913
Female, age 42, unknown
106.6
1995
Male, age 72, unknown
105.6
2587
Male, age 74, left hemisphere
99.4
2664
Male, age 75, both hemispheres
95.7
1796
Male, age 53, unknown
94.4
1895
Male, age 76, right hemisphere
93.9
2261
Male, age 18, unknown
89.0
2087
Female, age 72, unknown
86.0
1839
Male, age 51, unknown
85.6
2668
Female, age 75, unknown
83.2
Ventral tegmental area nTPM: 87.4
2223
Female, age 72, unknown
102.1
1915
Female, age 42, unknown
89.1
2218
Male, age 76, both hemispheres
86.1
2021
Male, age 53, unknown
84.8
1942
Male, age 51, unknown
83.0
2410
Female, age 72, unknown
79.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
94.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 94.8
Samples: 139
Max nTPM: 201.9
Min nTPM: 58.3
Std nTPM: 26.2
Median nTPM: 89.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
201.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
196.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
195.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
170.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
163.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
155.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
147.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
145.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
135.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
134.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
131.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
129.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
129.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
126.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
125.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
124.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
123.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
119.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
119.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
115.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
114.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
114.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
114.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
113.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
112.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
112.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
112.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
111.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
111.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
110.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
109.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
109.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
107.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
106.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
106.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
102.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
102.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
101.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
101.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
100.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
100.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
100.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
100.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
98.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
98.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
98.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
98.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
98.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
97.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
96.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
96.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
96.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
96.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
95.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
95.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
94.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
94.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
94.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
93.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
93.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
93.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
92.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
92.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
92.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
91.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
90.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
90.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
90.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
89.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
89.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
89.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
88.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
87.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
86.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
86.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
85.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
85.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
85.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
85.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
84.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
84.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
84.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
84.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
84.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
83.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
83.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
83.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
83.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
82.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
82.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
81.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
81.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
81.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
81.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
81.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
80.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
80.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
79.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
79.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
79.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
79.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
78.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
78.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
77.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
77.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
77.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
77.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
76.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
76.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
76.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
75.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
75.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
73.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
73.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
72.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
72.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
72.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
72.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
72.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
72.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
70.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
69.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
69.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
69.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
69.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
68.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
68.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
67.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
67.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
67.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
67.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
66.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
65.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
62.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
61.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
61.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
60.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
59.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
58.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 54.0
Samples: 4
Max nTPM: 60.1
Min nTPM: 47.5
Sample A
Male
56.7
Sample B
Male
47.5
Sample C
Female
51.7
Sample D
Female
60.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.