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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
491.7
nTPM
HPA Brain:
253.3
nTPM
GTEx:
491.7
nTPM
FANTOM5:
389.8
Scaled Tags Per Million
Pig:
259.6
nTPM
Mouse:
159.2
nTPM
Allen mouse:
8.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
253.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 199.7
2019
Male, age 18, unknown
284.6
2411
Female, age 72, unknown
249.1
1870
Female, age 42, unknown
204.9
1827
Male, age 72, unknown
204.2
2828
Female, age 72, unknown
203.6
2586
Male, age 75, left hemisphere
177.2
1833
Male, age 53, unknown
175.2
2219
Male, age 76, both hemispheres
173.9
1830
Male, age 51, unknown
168.3
2666
Male, age 74, left hemisphere
155.6
Dorsal raphe nucleus nTPM: 203.0
2298
Female, age 72, unknown
235.6
1828
Male, age 53, unknown
223.2
2750
Male, age 76, both hemispheres
215.6
2047
Male, age 72, unknown
182.0
2016
Female, age 72, unknown
158.4
Inferior colliculus nTPM: 206.0
2097
Female, age 72, unknown
252.4
1890
Male, age 53, unknown
230.1
1848
Female, age 42, unknown
188.4
2849
Male, age 72, unknown
152.9
Median raphe nucleus nTPM: 187.6
2220
Male, age 76, midline
187.6
Periaquaductal grey, anterior nTPM: 209.0
1795
Male, age 51, unknown
222.2
2502
Female, age 75, unknown
202.5
1947
Male, age 18, unknown
202.3
Periaquaductal grey, dorsal nTPM: 154.6
2464
Female, age 72, unknown
169.1
1840
Male, age 53, unknown
155.5
1831
Male, age 72, unknown
149.2
2850
Male, age 76, both hemispheres
144.8
Periaquaductal grey, lateral nTPM: 166.6
2272
Male, age 74, both hemispheres
182.5
2053
Male, age 18, unknown
161.3
2140
Male, age 76, both hemispheres
155.9
Pretectal area nTPM: 224.7
2007
Male, age 72, unknown
302.3
1817
Female, age 42, unknown
281.1
1816
Male, age 51, unknown
261.6
1944
Female, age 72, unknown
250.9
2667
Female, age 75, unknown
230.6
1815
Male, age 53, unknown
222.5
2273
Male, age 74, both hemispheres
207.9
2316
Male, age 76, right hemisphere
199.3
2224
Female, age 72, unknown
190.9
2825
Male, age 18, unknown
168.9
2407
Male, age 75, both hemispheres
155.5
Red nucleus nTPM: 253.3
2503
Female, age 72, unknown
286.6
1821
Female, age 72, unknown
284.8
2785
Male, age 18, unknown
273.0
2725
Female, age 75, unknown
268.9
2227
Male, age 72, unknown
265.0
2769
Male, age 72, unknown
264.7
2588
Male, age 74, left hemisphere
263.1
1865
Male, age 51, unknown
243.8
1904
Male, age 53, unknown
239.9
1954
Female, age 42, unknown
237.3
2823
Male, age 76, right hemisphere
230.5
2584
Male, age 75, left hemisphere
182.4
Substantia nigra nTPM: 220.2
1889
Female, age 72, unknown
278.9
1916
Female, age 42, unknown
272.4
1851
Male, age 51, unknown
252.2
2241
Male, age 72, unknown
235.3
2409
Female, age 72, unknown
228.7
1941
Male, age 53, unknown
212.9
2665
Male, age 74, both hemispheres
201.4
2590
Female, age 75, unknown
196.8
2699
Male, age 18, unknown
167.9
2583
Male, age 75, right hemisphere
155.1
Superior colliculus nTPM: 191.8
2087
Female, age 72, unknown
232.4
2587
Male, age 74, left hemisphere
220.0
1796
Male, age 53, unknown
218.4
2261
Male, age 18, unknown
215.1
2668
Female, age 75, unknown
191.8
1913
Female, age 42, unknown
190.7
1895
Male, age 76, right hemisphere
187.3
1839
Male, age 51, unknown
173.3
1995
Male, age 72, unknown
166.2
2664
Male, age 75, both hemispheres
122.7
Ventral tegmental area nTPM: 224.1
2223
Female, age 72, unknown
261.5
1915
Female, age 42, unknown
244.4
2410
Female, age 72, unknown
244.3
2218
Male, age 76, both hemispheres
217.1
1942
Male, age 51, unknown
198.4
2021
Male, age 53, unknown
178.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
491.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 491.7
Samples: 139
Max nTPM: 1265.9
Min nTPM: 224.0
Std nTPM: 149.7
Median nTPM: 475.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1265.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1191.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
849.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
814.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
766.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
751.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
748.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
739.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
714.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
706.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
671.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
670.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
660.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
646.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
642.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
640.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
633.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
632.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
629.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
613.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
604.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
600.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
599.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
595.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
594.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
590.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
587.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
584.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
582.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
581.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
577.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
572.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
566.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
563.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
562.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
555.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
552.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
549.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
545.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
545.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
545.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
539.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
538.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
536.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
534.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
525.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
522.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
515.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
513.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
511.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
507.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
506.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
505.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
503.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
502.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
498.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
496.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
493.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
488.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
487.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
487.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
484.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
483.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
483.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
481.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
479.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
477.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
475.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
475.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
475.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
471.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
470.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
470.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
467.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
463.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
463.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
460.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
458.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
458.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
452.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
448.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
447.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
446.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
445.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
442.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
440.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
440.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
433.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
430.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
429.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
428.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
427.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
427.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
426.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
423.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
422.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
420.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
417.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
416.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
416.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
416.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
415.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
415.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
411.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
409.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
408.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
401.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
401.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
399.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
395.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
394.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
391.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
378.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
376.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
372.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
368.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
364.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
363.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
358.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
351.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
349.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
348.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
344.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
343.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
343.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
331.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
330.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
325.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
320.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
310.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
310.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
302.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
292.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
275.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
266.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
238.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
230.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
227.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
224.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
159.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 159.2
Samples: 4
Max nTPM: 179.1
Min nTPM: 138.1
Sample A
Male
179.1
Sample B
Male
154.0
Sample C
Female
138.1
Sample D
Female
165.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.