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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
244.7
nTPM
HPA Brain:
178.3
nTPM
GTEx:
244.7
nTPM
FANTOM5:
118.4
Scaled Tags Per Million
Pig:
316.0
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
178.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 133.2
2411
Female, age 72, unknown
167.5
1833
Male, age 53, unknown
150.0
1870
Female, age 42, unknown
148.3
2219
Male, age 76, both hemispheres
134.9
1830
Male, age 51, unknown
132.8
2019
Male, age 18, unknown
130.6
2586
Male, age 75, left hemisphere
128.0
2666
Male, age 74, left hemisphere
125.2
1827
Male, age 72, unknown
122.2
2828
Female, age 72, unknown
92.4
Dorsal raphe nucleus nTPM: 178.3
1828
Male, age 53, unknown
239.2
2047
Male, age 72, unknown
200.4
2298
Female, age 72, unknown
185.7
2016
Female, age 72, unknown
136.2
2750
Male, age 76, both hemispheres
130.0
Inferior colliculus nTPM: 165.2
1848
Female, age 42, unknown
179.4
2849
Male, age 72, unknown
168.3
2097
Female, age 72, unknown
163.9
1890
Male, age 53, unknown
149.1
Median raphe nucleus nTPM: 164.1
2220
Male, age 76, midline
164.1
Periaquaductal grey, anterior nTPM: 137.7
1947
Male, age 18, unknown
165.0
2502
Female, age 75, unknown
132.0
1795
Male, age 51, unknown
116.1
Periaquaductal grey, dorsal nTPM: 130.9
2850
Male, age 76, both hemispheres
145.8
1840
Male, age 53, unknown
142.3
2464
Female, age 72, unknown
124.9
1831
Male, age 72, unknown
110.5
Periaquaductal grey, lateral nTPM: 126.5
2272
Male, age 74, both hemispheres
135.2
2140
Male, age 76, both hemispheres
127.0
2053
Male, age 18, unknown
117.4
Pretectal area nTPM: 121.3
2825
Male, age 18, unknown
156.6
2224
Female, age 72, unknown
147.0
2667
Female, age 75, unknown
141.2
1817
Female, age 42, unknown
129.3
2007
Male, age 72, unknown
126.0
2273
Male, age 74, both hemispheres
125.2
2316
Male, age 76, right hemisphere
117.2
1816
Male, age 51, unknown
103.1
1944
Female, age 72, unknown
100.8
2407
Male, age 75, both hemispheres
98.0
1815
Male, age 53, unknown
89.5
Red nucleus nTPM: 146.3
1821
Female, age 72, unknown
240.1
2769
Male, age 72, unknown
176.5
2227
Male, age 72, unknown
175.7
1954
Female, age 42, unknown
159.1
2823
Male, age 76, right hemisphere
148.8
1865
Male, age 51, unknown
137.8
2503
Female, age 72, unknown
132.4
2725
Female, age 75, unknown
124.1
2588
Male, age 74, left hemisphere
123.8
1904
Male, age 53, unknown
120.9
2785
Male, age 18, unknown
109.1
2584
Male, age 75, left hemisphere
107.5
Substantia nigra nTPM: 173.1
1916
Female, age 42, unknown
219.1
1941
Male, age 53, unknown
207.2
2241
Male, age 72, unknown
199.5
1851
Male, age 51, unknown
182.1
2409
Female, age 72, unknown
175.1
2699
Male, age 18, unknown
173.7
2665
Male, age 74, both hemispheres
166.4
1889
Female, age 72, unknown
156.3
2590
Female, age 75, unknown
140.6
2583
Male, age 75, right hemisphere
111.1
Superior colliculus nTPM: 110.3
1895
Male, age 76, right hemisphere
167.2
1839
Male, age 51, unknown
152.8
2587
Male, age 74, left hemisphere
138.5
2668
Female, age 75, unknown
127.3
1796
Male, age 53, unknown
112.9
2664
Male, age 75, both hemispheres
98.4
2261
Male, age 18, unknown
91.7
2087
Female, age 72, unknown
91.1
1913
Female, age 42, unknown
63.8
1995
Male, age 72, unknown
59.5
Ventral tegmental area nTPM: 159.0
1915
Female, age 42, unknown
198.2
2410
Female, age 72, unknown
183.4
2218
Male, age 76, both hemispheres
166.2
2223
Female, age 72, unknown
144.9
1942
Male, age 51, unknown
140.2
2021
Male, age 53, unknown
121.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
244.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 244.7
Samples: 139
Max nTPM: 677.4
Min nTPM: 88.6
Std nTPM: 98.0
Median nTPM: 225.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
677.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
535.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
488.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
480.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
469.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
460.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
450.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
447.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
428.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
408.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
403.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
399.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
373.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
368.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
362.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
359.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
359.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
354.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
350.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
348.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
347.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
341.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
336.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
316.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
315.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
310.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
309.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
307.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
307.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
306.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
306.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
306.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
298.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
298.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
295.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
294.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
292.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
292.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
289.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
288.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
287.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
284.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
278.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
277.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
274.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
273.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
273.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
269.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
267.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
266.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
264.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
264.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
253.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
253.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
247.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
244.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
244.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
241.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
239.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
239.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
238.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
237.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
236.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
235.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
234.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
232.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
231.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
227.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
227.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
225.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
222.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
220.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
217.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
216.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
216.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
211.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
208.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
206.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
206.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
204.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
204.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
201.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
200.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
197.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
197.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
197.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
196.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
196.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
195.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
192.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
192.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
192.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
191.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
191.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
190.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
188.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
185.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
185.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
184.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
184.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
183.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
182.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
182.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
182.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
178.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
175.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
173.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
171.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
171.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
169.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
168.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
166.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
162.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
158.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
157.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
157.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
156.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
154.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
153.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
148.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
147.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
147.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
144.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
144.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
143.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
137.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
137.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
133.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
132.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
132.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
131.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
124.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
118.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
116.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
113.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
108.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
106.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
99.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
88.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.