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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
223.0
nTPM
FANTOM5:
368.3
Scaled Tags Per Million
Pig:
335.6
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
223.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 144.0
1984
Male, age 76, both hemispheres
162.4
2090
Male, age 80, both hemispheres
151.2
2301
Female, age 85, both hemispheres
134.5
2188
Female, age 91, both hemispheres
128.0
Dorsal cochlear nucleus nTPM: 154.7
2058
Male, age 76, both hemispheres
178.9
2802
Male, age 74, right hemisphere
159.2
2370
Male, age 61, both hemispheres
153.4
2187
Female, age 91, both hemispheres
145.4
2378
Male, age 80, both hemispheres
136.6
Dorsal tegmental nucleus nTPM: 159.7
2083
Male, age 80, both hemispheres
193.9
2358
Male, age 61, both hemispheres
153.1
1936
Male, age 76, left hemisphere
152.1
2326
Male, age 74, both hemispheres
139.7
Dorsolateral tegmental area nTPM: 162.4
2141
Male, age 76, both hemispheres
196.4
2654
Male, age 80, both hemispheres
195.5
2751
Female, age 85, both hemispheres
169.1
2360
Male, age 74, both hemispheres
153.1
2337
Male, age 61, both hemispheres
98.1
Kolliker-Fuse nucleus nTPM: 164.9
2163
Male, age 80, both hemispheres
222.8
2315
Male, age 76, right hemisphere
144.3
2793
Female, age 91, left hemisphere
127.6
Lateral lemniscal nuclei nTPM: 196.9
2169
Male, age 76, both hemispheres
267.4
2036
Male, age 80, both hemispheres
232.5
2746
Female, age 85, left hemisphere
197.0
2453
Male, age 74, right hemisphere
180.8
2320
Female, age 91, left hemisphere
106.6
Lateral parabrachial nucleus nTPM: 162.9
2139
Female, age 85, right hemisphere
243.1
2013
Male, age 80, both hemispheres
165.0
2790
Male, age 61, both hemispheres
141.3
2792
Male, age 76, both hemispheres
102.2
Lateral vestibular nucleus nTPM: 184.7
2184
Male, age 76, both hemispheres
208.1
2311
Male, age 80, both hemispheres
161.4
Locus coeruleus nTPM: 179.2
2123
Female, age 91, both hemispheres
232.8
2720
Male, age 74, both hemispheres
193.0
2788
Male, age 74, unknown
180.1
2014
Male, age 55, unknown
167.8
2162
Male, age 80, both hemispheres
166.9
2317
Female, age 72, unknown
157.7
1980
Male, age 76, both hemispheres
156.3
Medial parabrachial nucleus nTPM: 164.9
2854
Male, age 80, both hemispheres
200.1
2170
Female, age 91, both hemispheres
174.7
2156
Male, age 61, both hemispheres
163.8
2786
Male, age 76, both hemispheres
159.9
2463
Female, age 85, right hemisphere
126.1
Medial periolivary nuclei nTPM: 190.1
2171
Female, age 85, both hemispheres
291.0
2063
Male, age 76, both hemispheres
258.1
2791
Male, age 74, right hemisphere
163.5
2081
Male, age 80, both hemispheres
129.6
2458
Female, age 91, both hemispheres
108.2
Motor facial nucleus nTPM: 183.7
2062
Male, age 76, both hemispheres
277.4
2365
Male, age 74, right hemisphere
189.5
2697
Female, age 85, both hemispheres
183.0
2327
Male, age 80, both hemispheres
156.3
2126
Male, age 61, both hemispheres
149.8
2795
Female, age 91, both hemispheres
146.1
Motor trigeminal nucleus nTPM: 156.6
2079
Male, age 80, both hemispheres
187.5
2309
Male, age 76, both hemispheres
176.6
2335
Male, age 61, both hemispheres
165.4
2560
Male, age 74, both hemispheres
148.9
2321
Female, age 91, both hemispheres
104.5
Nuclei of the trapezoid body nTPM: 214.5
2735
Female, age 85, both hemispheres
268.8
2159
Male, age 61, both hemispheres
268.5
1983
Male, age 76, both hemispheres
250.7
2166
Male, age 80, both hemispheres
172.2
2368
Female, age 91, both hemispheres
112.5
Nucleus raphe magnus nTPM: 223.0
2160
Male, age 61, both hemispheres
343.4
2172
Female, age 85, both hemispheres
287.1
2455
Male, age 74, both hemispheres
224.8
2051
Male, age 76, both hemispheres
197.0
2328
Male, age 80, both hemispheres
161.7
2459
Female, age 91, both hemispheres
124.1
Paramedian reticular nucleus nTPM: 220.7
2050
Female, age 85, both hemispheres
267.6
2057
Male, age 80, both hemispheres
237.3
2313
Male, age 61, both hemispheres
211.4
2052
Male, age 76, both hemispheres
166.5
Pedunculopontine tegmental nucleus nTPM: 163.2
2334
Male, age 80, both hemispheres
170.9
1921
Female, age 85, both hemispheres
166.7
2338
Male, age 61, both hemispheres
151.9
Pontine nuclei nTPM: 217.6
2787
Female, age 85, both hemispheres
297.4
2727
Male, age 61, right hemisphere
296.8
1863
Male, age 55, unknown
269.5
1968
Male, age 76, left hemisphere
245.0
2109
Female, age 72, unknown
227.9
2454
Male, age 74, left hemisphere
142.4
2115
Male, age 80, left hemisphere
140.1
2319
Female, age 91, both hemispheres
121.9
Pontine raphe nucleus nTPM: 211.2
2122
Female, age 85, midline
260.5
2853
Male, age 76, midline
161.8
Posteroventral cochlear nucleus nTPM: 150.3
2752
Female, age 85, both hemispheres
225.1
2070
Male, age 76, both hemispheres
182.6
2371
Male, age 61, both hemispheres
140.2
2341
Male, age 80, both hemispheres
112.4
2135
Female, age 91, both hemispheres
91.2
Principal sensory trigeminal nucleus nTPM: 200.3
2158
Male, age 61, both hemispheres
278.3
2008
Male, age 80, left hemisphere
210.6
2324
Male, age 76, both hemispheres
198.8
2367
Female, age 91, left hemisphere
113.4
Reticular pontine nucleus, caudal nTPM: 158.0
2092
Male, age 76, both hemispheres
204.4
2332
Male, age 80, right hemisphere
177.1
2559
Male, age 74, both hemispheres
139.0
2457
Female, age 91, both hemispheres
111.5
Reticular pontine nucleus, oral nTPM: 170.3
2012
Female, age 85, both hemispheres
207.5
1939
Male, age 80, both hemispheres
185.5
2167
Male, age 76, both hemispheres
182.3
2361
Male, age 74, both hemispheres
162.8
2366
Female, age 91, both hemispheres
113.2
Reticulotegmental nucleus nTPM: 162.9
2325
Male, age 76, both hemispheres
206.6
2333
Male, age 80, both hemispheres
161.0
2452
Male, age 74, both hemispheres
151.2
2322
Female, age 91, both hemispheres
132.7
Spinal trigeminal nucleus, oral nTPM: 172.0
2164
Male, age 80, both hemispheres
182.8
2737
Female, age 85, both hemispheres
181.9
1978
Male, age 76, both hemispheres
151.5
Subcoeruleus area nTPM: 167.8
1958
Male, age 80, both hemispheres
200.2
2323
Female, age 91, left hemisphere
196.6
2089
Male, age 76, left hemisphere
172.8
2451
Male, age 74, both hemispheres
137.5
2369
Female, age 85, left hemisphere
131.8
Superior olive nTPM: 177.2
1875
Female, age 85, both hemispheres
256.2
2364
Male, age 74, right hemisphere
177.0
2020
Male, age 76, both hemispheres
172.0
2329
Male, age 80, right hemisphere
152.8
2561
Female, age 91, both hemispheres
128.2
Ventral periolivary nuclei nTPM: 197.0
2130
Female, age 85, both hemispheres
272.7
2165
Male, age 80, both hemispheres
222.3
2023
Male, age 76, both hemispheres
162.5
2794
Female, age 91, left hemisphere
130.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 166.5
2840
Female, age 85, both hemispheres
227.0
2449
Male, age 74, both hemispheres
191.1
1959
Male, age 76, both hemispheres
186.8
2161
Male, age 80, both hemispheres
150.7
2359
Male, age 61, both hemispheres
143.1
2456
Female, age 91, both hemispheres
100.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.