DBNL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:37.3 FPKM
GTEx:11.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020265

 

Antibody HPA027735

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

37.3

overview Male, age 54
Sample 1
FPKM: 35.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 43.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 35.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 32.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 51.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 36.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 25.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.1
Samples: 149

Max RPKM: 18.3
Min RPKM: 4.6
Std RPKM: 2.5
Median RPKM: 11
GTEX-YEC3-2026-SM-4WWFL 18.3
GTEX-11TT1-0926-SM-5GU5M 18.3
GTEX-X15G-1526-SM-4PQZM 15.8
GTEX-13CF3-1326-SM-5LZXZ 15.2
GTEX-ZP4G-1526-SM-57WE5 15.1
GTEX-117YX-0526-SM-5EGJH 15.1
GTEX-11P7K-1826-SM-5HL5A 15.0
GTEX-XAJ8-0726-SM-47JY5 15.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 19.8
Min RPKM: 6.9
Std RPKM: 2.5
Median RPKM: 12.6
GTEX-O5YT-1426-SM-3MJHC 19.8
GTEX-144GN-1126-SM-5LU33 19.0
GTEX-146FQ-1926-SM-5NQBY 18.9
GTEX-QLQ7-1126-SM-4R1KN 18.7
GTEX-XAJ8-0426-SM-47JYJ 18.2
GTEX-11TT1-1026-SM-5PNW7 18.0
GTEX-1399R-2226-SM-5P9JB 17.9
GTEX-117YX-0826-SM-5H11J 17.8
Show all