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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
89.3
nTPM
HPA Brain:
101.3
nTPM
GTEx:
89.3
nTPM
FANTOM5:
268.9
Scaled Tags Per Million
Pig:
144.8
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
101.3
Sample id
Sample description
nTPM
Amygdala nTPM: 101.3
2814
Male, age 76, right hemisphere
124.7
2695
Female, age 67, right hemisphere
110.7
2514
Male, age 75, right hemisphere
100.1
1987
Female, age 91, left hemisphere
92.2
2517
Female, age 94, left hemisphere
78.7
Basal amygdala nTPM: 75.4
2609
Male, age 75, right hemisphere
96.5
1955
Male, age 76, both hemispheres
92.4
2110
Male, age 80, left hemisphere
80.7
2243
Female, age 91, right hemisphere
68.3
2685
Female, age 94, left hemisphere
65.9
2827
Female, age 67, right hemisphere
48.8
Central amygdala nTPM: 92.9
2515
Male, age 75, right hemisphere
113.3
1905
Male, age 76, both hemispheres
111.0
2239
Male, age 80, left hemisphere
83.5
2701
Female, age 91, right hemisphere
79.9
2826
Female, age 94, left hemisphere
77.0
Corticomedial amygdala nTPM: 79.2
2428
Male, age 75, right hemisphere
104.8
2240
Male, age 76, both hemispheres
93.8
2829
Male, age 80, left hemisphere
76.2
2429
Female, age 94, left hemisphere
76.1
2242
Female, age 91, right hemisphere
70.5
2535
Female, age 67, right hemisphere
53.6
Lateral amygdala nTPM: 80.4
1883
Male, age 76, both hemispheres
113.3
2516
Male, age 75, right hemisphere
101.5
2534
Female, age 94, left hemisphere
79.9
2255
Female, age 91, right hemisphere
68.8
2256
Male, age 80, left hemisphere
67.5
2830
Female, age 67, right hemisphere
51.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
89.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 89.3
Samples: 152
Max nTPM: 185.1
Min nTPM: 55.2
Std nTPM: 19.3
Median nTPM: 88.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
185.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
160.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
141.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
138.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
135.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
134.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
129.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
128.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
119.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
118.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
118.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
116.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
115.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
112.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
107.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
106.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
106.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
104.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
103.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
103.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
103.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
102.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
102.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
102.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
102.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
102.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
102.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
101.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
101.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
101.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
100.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
100.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
100.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
100.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
100.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
99.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
99.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
98.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
97.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
97.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
97.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
97.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
96.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
96.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
96.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
96.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
96.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
95.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
95.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
94.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
93.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
93.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
92.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
92.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
92.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
91.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
90.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
90.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
90.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
90.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
90.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
90.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
90.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
90.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
90.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
89.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
89.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
89.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
88.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
88.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
88.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
88.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
88.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
88.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
88.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
88.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
88.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
88.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
87.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
86.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
86.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
86.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
86.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
86.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
86.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
84.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
84.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
84.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
84.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
84.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
83.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
83.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
83.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
82.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
82.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
82.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
82.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
82.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
81.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
81.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
81.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
81.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
81.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
81.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
80.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
80.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
80.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
79.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
79.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
79.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
77.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
77.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
76.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
76.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
75.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
75.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
75.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
75.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
74.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
73.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
72.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
72.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
72.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
72.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
72.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
72.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
71.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
71.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
71.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
69.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
68.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
67.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
66.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
66.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
66.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
65.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
65.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
65.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
65.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
65.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
64.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
63.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
63.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
63.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
62.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
61.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
61.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
58.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
55.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.