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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
120.7
nTPM
HPA Brain:
154.1
nTPM
GTEx:
120.7
nTPM
FANTOM5:
243.5
Scaled Tags Per Million
Pig:
241.8
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
154.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 117.8
2019
Male, age 18, unknown
150.7
2586
Male, age 75, left hemisphere
142.2
2411
Female, age 72, unknown
124.1
1870
Female, age 42, unknown
114.6
2666
Male, age 74, left hemisphere
110.9
2219
Male, age 76, both hemispheres
109.6
1833
Male, age 53, unknown
109.3
1830
Male, age 51, unknown
107.5
2828
Female, age 72, unknown
107.2
1827
Male, age 72, unknown
101.9
Dorsal raphe nucleus nTPM: 125.0
2047
Male, age 72, unknown
132.4
2298
Female, age 72, unknown
129.9
1828
Male, age 53, unknown
128.1
2750
Male, age 76, both hemispheres
124.9
2016
Female, age 72, unknown
109.6
Inferior colliculus nTPM: 117.6
2097
Female, age 72, unknown
131.9
1848
Female, age 42, unknown
120.9
1890
Male, age 53, unknown
120.2
2849
Male, age 72, unknown
97.2
Median raphe nucleus nTPM: 138.6
2220
Male, age 76, midline
138.6
Periaquaductal grey, anterior nTPM: 109.4
2502
Female, age 75, unknown
126.8
1947
Male, age 18, unknown
104.0
1795
Male, age 51, unknown
97.5
Periaquaductal grey, dorsal nTPM: 100.0
2850
Male, age 76, both hemispheres
105.2
1840
Male, age 53, unknown
102.8
2464
Female, age 72, unknown
102.1
1831
Male, age 72, unknown
90.0
Periaquaductal grey, lateral nTPM: 91.1
2140
Male, age 76, both hemispheres
93.2
2272
Male, age 74, both hemispheres
90.1
2053
Male, age 18, unknown
89.9
Pretectal area nTPM: 114.5
1817
Female, age 42, unknown
141.9
2007
Male, age 72, unknown
140.7
1944
Female, age 72, unknown
139.1
1816
Male, age 51, unknown
122.9
1815
Male, age 53, unknown
118.8
2667
Female, age 75, unknown
115.9
2224
Female, age 72, unknown
101.1
2407
Male, age 75, both hemispheres
99.6
2825
Male, age 18, unknown
95.5
2273
Male, age 74, both hemispheres
93.5
2316
Male, age 76, right hemisphere
90.2
Red nucleus nTPM: 123.8
1821
Female, age 72, unknown
166.5
1954
Female, age 42, unknown
141.3
1865
Male, age 51, unknown
131.3
2785
Male, age 18, unknown
130.9
1904
Male, age 53, unknown
128.3
2769
Male, age 72, unknown
126.0
2227
Male, age 72, unknown
123.8
2503
Female, age 72, unknown
113.4
2584
Male, age 75, left hemisphere
112.2
2823
Male, age 76, right hemisphere
104.7
2725
Female, age 75, unknown
104.3
2588
Male, age 74, left hemisphere
103.4
Substantia nigra nTPM: 154.1
2241
Male, age 72, unknown
205.7
1916
Female, age 42, unknown
202.3
1941
Male, age 53, unknown
171.4
1851
Male, age 51, unknown
171.1
2409
Female, age 72, unknown
153.6
1889
Female, age 72, unknown
152.5
2699
Male, age 18, unknown
143.1
2583
Male, age 75, right hemisphere
125.2
2665
Male, age 74, both hemispheres
111.7
2590
Female, age 75, unknown
104.6
Superior colliculus nTPM: 110.2
2668
Female, age 75, unknown
154.2
2087
Female, age 72, unknown
124.2
2664
Male, age 75, both hemispheres
116.8
1839
Male, age 51, unknown
105.2
2261
Male, age 18, unknown
104.5
1895
Male, age 76, right hemisphere
104.0
1796
Male, age 53, unknown
103.4
2587
Male, age 74, left hemisphere
102.4
1913
Female, age 42, unknown
98.3
1995
Male, age 72, unknown
88.9
Ventral tegmental area nTPM: 130.2
2410
Female, age 72, unknown
154.2
1915
Female, age 42, unknown
140.8
2218
Male, age 76, both hemispheres
133.1
2223
Female, age 72, unknown
123.1
1942
Male, age 51, unknown
122.7
2021
Male, age 53, unknown
106.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
120.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 120.7
Samples: 139
Max nTPM: 221.9
Min nTPM: 69.9
Std nTPM: 27.2
Median nTPM: 115.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
221.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
218.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
195.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
195.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
191.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
176.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
173.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
170.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
168.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
168.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
159.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
156.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
151.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
150.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
150.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
148.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
148.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
146.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
143.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
143.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
142.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
142.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
142.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
142.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
142.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
142.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
142.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
140.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
139.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
137.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
136.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
136.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
136.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
136.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
135.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
134.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
134.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
133.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
133.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
133.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
133.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
132.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
131.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
131.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
131.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
129.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
128.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
128.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
127.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
126.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
126.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
125.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
123.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
123.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
123.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
122.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
121.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
121.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
121.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
121.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
121.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
120.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
119.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
119.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
119.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
118.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
117.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
117.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
117.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
115.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
114.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
114.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
114.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
114.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
114.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
114.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
114.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
113.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
113.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
113.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
112.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
112.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
112.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
111.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
111.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
110.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
110.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
110.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
110.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
110.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
109.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
109.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
109.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
108.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
108.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
108.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
107.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
107.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
105.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
103.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
103.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
103.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
103.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
103.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
101.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
101.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
100.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
100.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
99.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
98.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
98.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
98.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
97.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
97.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
96.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
95.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
95.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
94.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
93.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
92.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
92.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
92.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
91.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
88.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
88.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
87.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
87.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
86.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
86.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
85.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
84.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
84.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
84.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
82.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
81.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
79.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
78.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
76.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
69.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.