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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
263.5
nTPM
FANTOM5:
482.5
Scaled Tags Per Million
Pig:
306.5
nTPM
Allen mouse:
8.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
263.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 157.9
1984
Male, age 76, both hemispheres
169.5
2188
Female, age 91, both hemispheres
169.1
2090
Male, age 80, both hemispheres
152.6
2301
Female, age 85, both hemispheres
140.4
Dorsal cochlear nucleus nTPM: 160.4
2187
Female, age 91, both hemispheres
174.4
2802
Male, age 74, right hemisphere
170.0
2058
Male, age 76, both hemispheres
155.1
2378
Male, age 80, both hemispheres
153.5
2370
Male, age 61, both hemispheres
148.9
Dorsal tegmental nucleus nTPM: 164.5
2083
Male, age 80, both hemispheres
181.3
2326
Male, age 74, both hemispheres
170.3
2358
Male, age 61, both hemispheres
157.5
1936
Male, age 76, left hemisphere
148.9
Dorsolateral tegmental area nTPM: 174.8
2654
Male, age 80, both hemispheres
191.8
2751
Female, age 85, both hemispheres
186.3
2360
Male, age 74, both hemispheres
182.0
2337
Male, age 61, both hemispheres
160.6
2141
Male, age 76, both hemispheres
153.1
Kolliker-Fuse nucleus nTPM: 184.0
2163
Male, age 80, both hemispheres
213.3
2315
Male, age 76, right hemisphere
180.4
2793
Female, age 91, left hemisphere
158.2
Lateral lemniscal nuclei nTPM: 224.5
2169
Male, age 76, both hemispheres
290.3
2036
Male, age 80, both hemispheres
261.8
2746
Female, age 85, left hemisphere
229.2
2453
Male, age 74, right hemisphere
191.1
2320
Female, age 91, left hemisphere
150.4
Lateral parabrachial nucleus nTPM: 187.9
2139
Female, age 85, right hemisphere
257.0
2013
Male, age 80, both hemispheres
200.5
2790
Male, age 61, both hemispheres
148.4
2792
Male, age 76, both hemispheres
145.7
Lateral vestibular nucleus nTPM: 176.2
2184
Male, age 76, both hemispheres
195.8
2311
Male, age 80, both hemispheres
156.7
Locus coeruleus nTPM: 223.1
2123
Female, age 91, both hemispheres
275.4
2014
Male, age 55, unknown
271.5
2788
Male, age 74, unknown
235.1
2317
Female, age 72, unknown
203.8
2720
Male, age 74, both hemispheres
200.7
1980
Male, age 76, both hemispheres
195.2
2162
Male, age 80, both hemispheres
180.3
Medial parabrachial nucleus nTPM: 175.7
2854
Male, age 80, both hemispheres
205.3
2170
Female, age 91, both hemispheres
198.0
2463
Female, age 85, right hemisphere
161.1
2786
Male, age 76, both hemispheres
159.2
2156
Male, age 61, both hemispheres
154.7
Medial periolivary nuclei nTPM: 229.3
2171
Female, age 85, both hemispheres
311.4
2063
Male, age 76, both hemispheres
307.2
2791
Male, age 74, right hemisphere
221.5
2081
Male, age 80, both hemispheres
167.0
2458
Female, age 91, both hemispheres
139.3
Motor facial nucleus nTPM: 206.7
2062
Male, age 76, both hemispheres
320.0
2365
Male, age 74, right hemisphere
225.6
2697
Female, age 85, both hemispheres
186.7
2126
Male, age 61, both hemispheres
173.5
2795
Female, age 91, both hemispheres
168.1
2327
Male, age 80, both hemispheres
166.6
Motor trigeminal nucleus nTPM: 163.2
2079
Male, age 80, both hemispheres
199.8
2560
Male, age 74, both hemispheres
168.2
2309
Male, age 76, both hemispheres
158.8
2335
Male, age 61, both hemispheres
153.7
2321
Female, age 91, both hemispheres
135.4
Nuclei of the trapezoid body nTPM: 247.3
2159
Male, age 61, both hemispheres
331.0
2735
Female, age 85, both hemispheres
300.5
1983
Male, age 76, both hemispheres
272.0
2166
Male, age 80, both hemispheres
180.5
2368
Female, age 91, both hemispheres
152.3
Nucleus raphe magnus nTPM: 244.2
2160
Male, age 61, both hemispheres
374.2
2172
Female, age 85, both hemispheres
287.7
2455
Male, age 74, both hemispheres
235.0
2051
Male, age 76, both hemispheres
222.7
2328
Male, age 80, both hemispheres
183.4
2459
Female, age 91, both hemispheres
162.4
Paramedian reticular nucleus nTPM: 223.9
2050
Female, age 85, both hemispheres
278.0
2057
Male, age 80, both hemispheres
217.0
2313
Male, age 61, both hemispheres
216.6
2052
Male, age 76, both hemispheres
183.9
Pedunculopontine tegmental nucleus nTPM: 185.9
2338
Male, age 61, both hemispheres
191.5
1921
Female, age 85, both hemispheres
185.0
2334
Male, age 80, both hemispheres
181.1
Pontine nuclei nTPM: 263.5
2727
Male, age 61, right hemisphere
381.3
1863
Male, age 55, unknown
334.5
2787
Female, age 85, both hemispheres
302.0
2109
Female, age 72, unknown
284.2
1968
Male, age 76, left hemisphere
258.6
2454
Male, age 74, left hemisphere
217.1
2319
Female, age 91, both hemispheres
167.1
2115
Male, age 80, left hemisphere
163.6
Pontine raphe nucleus nTPM: 220.3
2122
Female, age 85, midline
264.6
2853
Male, age 76, midline
176.1
Posteroventral cochlear nucleus nTPM: 171.0
2752
Female, age 85, both hemispheres
218.2
2070
Male, age 76, both hemispheres
175.5
2341
Male, age 80, both hemispheres
163.5
2371
Male, age 61, both hemispheres
149.6
2135
Female, age 91, both hemispheres
148.1
Principal sensory trigeminal nucleus nTPM: 218.1
2158
Male, age 61, both hemispheres
298.4
2008
Male, age 80, left hemisphere
246.6
2324
Male, age 76, both hemispheres
173.2
2367
Female, age 91, left hemisphere
154.4
Reticular pontine nucleus, caudal nTPM: 184.2
2092
Male, age 76, both hemispheres
235.9
2332
Male, age 80, right hemisphere
178.0
2559
Male, age 74, both hemispheres
175.1
2457
Female, age 91, both hemispheres
147.8
Reticular pontine nucleus, oral nTPM: 198.9
2361
Male, age 74, both hemispheres
244.1
2012
Female, age 85, both hemispheres
243.9
1939
Male, age 80, both hemispheres
195.0
2167
Male, age 76, both hemispheres
163.8
2366
Female, age 91, both hemispheres
147.8
Reticulotegmental nucleus nTPM: 172.2
2325
Male, age 76, both hemispheres
207.1
2322
Female, age 91, both hemispheres
161.8
2333
Male, age 80, both hemispheres
160.9
2452
Male, age 74, both hemispheres
158.9
Spinal trigeminal nucleus, oral nTPM: 180.2
2737
Female, age 85, both hemispheres
205.6
2164
Male, age 80, both hemispheres
182.5
1978
Male, age 76, both hemispheres
152.5
Subcoeruleus area nTPM: 188.4
1958
Male, age 80, both hemispheres
216.7
2323
Female, age 91, left hemisphere
198.2
2089
Male, age 76, left hemisphere
197.1
2369
Female, age 85, left hemisphere
174.1
2451
Male, age 74, both hemispheres
155.8
Superior olive nTPM: 216.8
1875
Female, age 85, both hemispheres
293.3
2020
Male, age 76, both hemispheres
240.3
2364
Male, age 74, right hemisphere
232.5
2329
Male, age 80, right hemisphere
168.9
2561
Female, age 91, both hemispheres
148.8
Ventral periolivary nuclei nTPM: 221.1
2130
Female, age 85, both hemispheres
261.4
2023
Male, age 76, both hemispheres
237.8
2165
Male, age 80, both hemispheres
231.5
2794
Female, age 91, left hemisphere
153.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 193.6
1959
Male, age 76, both hemispheres
220.6
2840
Female, age 85, both hemispheres
215.8
2449
Male, age 74, both hemispheres
208.0
2161
Male, age 80, both hemispheres
190.3
2359
Male, age 61, both hemispheres
185.7
2456
Female, age 91, both hemispheres
141.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
306.5
Pig sample
Sample description
nTPM
Pons nTPM: 306.5
Samples: 4
Max nTPM: 369.0
Min nTPM: 230.4
Sample A
Female
369.0
Sample B
Female
230.4
Sample C
Male
316.5
Sample D
Male
310.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.