AFG3L2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:44.7 FPKM
GTEx:19.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA004479

 

Antibody HPA004480

 

Endothelial cells

Medium   Low  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not available   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

44.7

overview Male, age 54
Sample 1
FPKM: 30.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 49.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 63.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 37.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 36.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 59.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 12.8
Samples: 149

Max RPKM: 20.9
Min RPKM: 4
Std RPKM: 3.8
Median RPKM: 12.3
GTEX-11EM3-1626-SM-5N9CO 20.9
GTEX-XBED-1726-SM-47JYO 20.9
GTEX-YEC3-2026-SM-4WWFL 20.0
GTEX-131XG-1526-SM-5GCNQ 19.8
GTEX-11I78-1326-SM-5PNY9 19.7
GTEX-ZLFU-1426-SM-4WWEU 18.8
GTEX-13111-1926-SM-5GCOL 18.5
GTEX-14E6E-1726-SM-5S2R6 18.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.6
Samples: 196

Max RPKM: 49.2
Min RPKM: 5
Std RPKM: 11.1
Median RPKM: 27.7
GTEX-U4B1-1126-SM-4DXV3 49.2
GTEX-11EM3-1526-SM-5A5KN 48.7
GTEX-111CU-1426-SM-5GZYP 48.6
GTEX-ZPIC-2226-SM-57WDX 45.9
GTEX-12BJ1-2126-SM-5BC5O 45.6
GTEX-131XG-1826-SM-5LZV4 45.5
GTEX-YB5E-1626-SM-5IFIQ 45.3
GTEX-WFG7-1526-SM-4LVMG 44.8
Show all