HUNK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.8 FPKM
GTEx:0.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA027295

 

Antibody HPA027372

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.8

overview Male, age 54
Sample 1
FPKM: 3.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 8.7
Min RPKM: 0.1
Std RPKM: 0.8
Median RPKM: 0.4
GTEX-ZDTS-2726-SM-5L3E2 8.7
GTEX-13U4I-2626-SM-5SI9C 2.6
GTEX-XXEK-1826-SM-4BRVC 2.5
GTEX-ZVZQ-2626-SM-59HLB 2.5
GTEX-ZYT6-2826-SM-5GICX 2.0
GTEX-ZAJG-2626-SM-5S2NU 2.0
GTEX-11ONC-1926-SM-5GU75 2.0
GTEX-11EMC-1426-SM-5N9E4 1.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.2
Samples: 196

Max RPKM: 4.6
Min RPKM: 0.1
Std RPKM: 0.7
Median RPKM: 1.1
GTEX-14AS3-1126-SM-5Q5CR 4.6
GTEX-ZY6K-1226-SM-5GZYL 3.8
GTEX-Y3I4-1426-SM-4TT9C 3.5
GTEX-XAJ8-0426-SM-47JYJ 3.5
GTEX-Z93S-2426-SM-5HL8N 3.3
GTEX-P78B-1726-SM-3P5ZV 3.0
GTEX-U4B1-1126-SM-4DXV3 2.5
GTEX-R53T-1326-SM-48FCQ 2.4
Show all