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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:297.0 FPKM
GTEx:115.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001462

 

Antibody CAB000157

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

297.0

overview Male, age 54
Sample 1
FPKM: 414.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 324.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 319.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 249.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 252.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 233.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 286.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

115.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 101.9
Samples: 149

Max RPKM: 176.7
Min RPKM: 47
Std RPKM: 24.5
Median RPKM: 101.3
GTEX-13SLW-2826-SM-5Q5ES 176.7
GTEX-YEC3-2026-SM-4WWFL 159.0
GTEX-YJ8A-1726-SM-5P9IQ 158.4
GTEX-148VJ-2426-SM-5NQ9Y 148.4
GTEX-ZVT4-2626-SM-5N9GJ 145.9
GTEX-13X6K-2726-SM-5O9DG 145.9
GTEX-WFON-1326-SM-4LVMN 145.9
GTEX-145LS-2926-SM-5O99G 145.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 128.8
Samples: 196

Max RPKM: 209.7
Min RPKM: 47.9
Std RPKM: 30.9
Median RPKM: 127.4
GTEX-1122O-1526-SM-5N9CL 209.7
GTEX-11EM3-1526-SM-5A5KN 197.5
GTEX-ZXES-1626-SM-5NQ7L 195.5
GTEX-OHPM-1426-SM-3TW8Y 195.2
GTEX-131XG-1826-SM-5LZV4 195.1
GTEX-R55G-1226-SM-48FDC 192.9
GTEX-PWN1-1426-SM-48TDF 188.8
GTEX-12ZZZ-2426-SM-5GCNN 187.3
Show all