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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
319.1
nTPM
Monaco:
196.3
nTPM
Schmiedel:
153.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
319.1
HPA sample
nTPM
gdT-cell nTPM: 167.0
Samples: 6
Max nTPM: 200.6
Min nTPM: 131.6
P10809_1007
193.3
P10809_1022
148.8
P10809_1041
200.6
P10809_1060
131.6
P10809_1077
154.3
P10809_1098
173.4
MAIT T-cell nTPM: 47.7
Samples: 6
Max nTPM: 71.3
Min nTPM: 15.8
P10809_1006
60.2
P10809_1024
29.7
P10809_1043
48.8
P10809_1062
15.8
P10809_1083
71.3
P10809_1097
60.2
Memory CD4 T-cell nTPM: 207.2
Samples: 6
Max nTPM: 256.7
Min nTPM: 128.0
P10809_1014
173.0
P10809_1026
253.6
P10809_1045
247.6
P10809_1064
128.0
P10809_1086
256.7
P10809_1113
184.0
Memory CD8 T-cell nTPM: 97.3
Samples: 5
Max nTPM: 157.5
Min nTPM: 53.8
P10809_1012
131.6
P10809_1027
53.8
P10809_1046
157.5
P10809_1065
73.7
P10809_1111
69.8
Naive CD4 T-cell nTPM: 319.1
Samples: 6
Max nTPM: 435.3
Min nTPM: 241.0
P10809_1015
241.0
P10809_1030
358.9
P10809_1049
435.3
P10809_1068
269.0
P10809_1085
323.8
P10809_1112
286.6
Naive CD8 T-cell nTPM: 194.3
Samples: 6
Max nTPM: 249.1
Min nTPM: 143.3
P10809_1016
175.7
P10809_1031
230.8
P10809_1050
249.1
P10809_1069
143.3
P10809_1087
155.4
P10809_1110
211.2
T-reg nTPM: 66.9
Samples: 6
Max nTPM: 117.5
Min nTPM: 35.2
P10809_1018
37.0
P10809_1037
97.2
P10809_1056
117.5
P10809_1075
35.2
P10809_1094
57.1
P10809_1106
57.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.4
Samples: 4
Max nTPM: 164.6
Min nTPM: 41.5
RHH5202_R3573
41.5
RHH5230_R3602
50.8
RHH5259_R3631
92.7
RHH5288_R3660
164.6
Effector memory CD8 T-cell nTPM: 38.8
Samples: 4
Max nTPM: 85.2
Min nTPM: 5.6
RHH5203_R3574
5.6
RHH5231_R3603
36.5
RHH5260_R3632
85.2
RHH5289_R3661
28.0
MAIT T-cell nTPM: 9.4
Samples: 4
Max nTPM: 14.6
Min nTPM: 2.3
RHH5233_R3605
7.6
RHH5205_R3576
2.3
RHH5262_R3634
13.0
RHH5297_R3663
14.6
Memory CD4 T-cell TFH nTPM: 103.4
Samples: 4
Max nTPM: 182.3
Min nTPM: 53.3
RHH5300_R3666
80.9
RHH5236_R3608
182.3
RHH5265_R3637
97.2
RHH5208_R3579
53.3
Memory CD4 T-cell Th1 nTPM: 106.9
Samples: 4
Max nTPM: 154.2
Min nTPM: 68.3
RHH5210_R3581
108.8
RHH5302_R3668
154.2
RHH5238_R3610
68.3
RHH5267_R3639
96.4
Memory CD4 T-cell Th1/Th17 nTPM: 43.6
Samples: 4
Max nTPM: 71.9
Min nTPM: 20.2
RHH5303_R3669
71.9
RHH5211_R3582
23.9
RHH5239_R3611
20.2
RHH5268_R3640
58.3
Memory CD4 T-cell Th17 nTPM: 80.4
Samples: 4
Max nTPM: 96.3
Min nTPM: 62.2
RHH5304_R3670
62.2
RHH5212_R3583
87.3
RHH5240_R3612
96.3
RHH5269_R3641
75.9
Memory CD4 T-cell Th2 nTPM: 196.3
Samples: 4
Max nTPM: 251.4
Min nTPM: 172.5
RHH5305_R3671
181.7
RHH5213_R3584
172.5
RHH5241_R3613
251.4
RHH5270_R3642
179.5
Naive CD4 T-cell nTPM: 157.1
Samples: 4
Max nTPM: 221.6
Min nTPM: 131.5
RHH5306_R3672
143.6
RHH5214_R3585
221.6
RHH5242_R3614
131.5
RHH5271_R3643
131.7
Naive CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 155.2
Min nTPM: 63.3
RHH5201_R3572
89.7
RHH5229_R3601
63.3
RHH5258_R3630
155.2
RHH5287_R3659
103.1
Non-Vd2 gdTCR nTPM: 34.8
Samples: 4
Max nTPM: 59.1
Min nTPM: 10.5
RHH5235_R3607
17.9
RHH5264_R3636
51.6
RHH5207_R3578
10.5
RHH5299_R3665
59.1
T-reg nTPM: 91.1
Samples: 4
Max nTPM: 116.0
Min nTPM: 65.9
RHH5301_R3667
107.6
RHH5237_R3609
116.0
RHH5266_R3638
74.8
RHH5209_R3580
65.9
Terminal effector memory CD4 T-cell nTPM: 90.5
Samples: 2
Max nTPM: 151.9
Min nTPM: 29.1
RHH5243_R3615
29.1
RHH5272_R3644
151.9
Terminal effector memory CD8 T-cell nTPM: 52.2
Samples: 4
Max nTPM: 68.5
Min nTPM: 29.7
RHH5232_R3604
68.5
RHH5204_R3575
29.7
RHH5261_R3633
68.3
RHH5296_R3662
42.1
Vd2 gdTCR nTPM: 97.2
Samples: 4
Max nTPM: 180.1
Min nTPM: 58.5
RHH5234_R3606
58.5
RHH5206_R3577
77.3
RHH5263_R3635
73.0
RHH5298_R3664
180.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.