ARNT

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.2 FPKM
GTEx:12.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA001759

 

Antibody CAB004318

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

14.2

overview Male, age 54
Sample 1
FPKM: 11.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 15.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 18.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.2
Samples: 149

Max RPKM: 22.7
Min RPKM: 7.5
Std RPKM: 2.1
Median RPKM: 12.9
GTEX-14E6C-2226-SM-5QGQG 22.7
GTEX-11WQK-2526-SM-5CVL8 20.0
GTEX-148VJ-2426-SM-5NQ9Y 19.3
GTEX-WFON-1326-SM-4LVMN 19.2
GTEX-131XG-1526-SM-5GCNQ 17.2
GTEX-117YX-0526-SM-5EGJH 16.8
GTEX-Y114-1626-SM-4TT7I 16.3
GTEX-11P81-1426-SM-5P9JN 16.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.0
Samples: 196

Max RPKM: 19.3
Min RPKM: 6.5
Std RPKM: 2.4
Median RPKM: 11.5
GTEX-13O3P-2326-SM-5KM55 19.3
GTEX-117YX-0826-SM-5H11J 18.7
GTEX-13O3O-2526-SM-5L3DR 18.3
GTEX-14BMV-2426-SM-5S2PP 18.3
GTEX-1339X-1626-SM-5IJDN 18.0
GTEX-148VJ-2626-SM-5QGPI 17.5
GTEX-ZXES-1626-SM-5NQ7L 17.4
GTEX-U3ZH-1326-SM-4DXSF 17.2
Show all