FER

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:2.4 FPKM
GTEx:2.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007641

 

Antibody CAB022464

 

Endothelial cells

Low   Medium  

Glandular cells

Low   Medium  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

2.4

overview Male, age 54
Sample 1
FPKM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

2.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 4.1
Min RPKM: 1.2
Std RPKM: 0.5
Median RPKM: 2.8
GTEX-145LS-2926-SM-5O99G 4.1
GTEX-13SLW-2826-SM-5Q5ES 4.1
GTEX-139D8-2926-SM-5IJBM 3.9
GTEX-117XS-2226-SM-5GIE1 3.9
GTEX-13OW5-2826-SM-5KM1G 3.9
GTEX-YJ8O-1426-SM-5PNV9 3.8
GTEX-ZVT4-2626-SM-5N9GJ 3.7
GTEX-ZYT6-2826-SM-5GICX 3.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.7
Samples: 196

Max RPKM: 4.1
Min RPKM: 0.4
Std RPKM: 0.8
Median RPKM: 1.3
GTEX-ZYFC-2626-SM-5NQ6S 4.1
GTEX-U3ZH-1326-SM-4DXSF 3.8
GTEX-11P81-1126-SM-5GU5G 3.5
GTEX-13O3O-2526-SM-5L3DR 3.5
GTEX-111VG-2226-SM-5N9DU 3.5
GTEX-XXEK-1926-SM-4BRVD 3.5
GTEX-111YS-1626-SM-5GZZ9 3.3
GTEX-13FHP-2426-SM-5KLZ5 3.3
Show all