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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
249.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 249.8
Samples: 152
Max nTPM: 648.8
Min nTPM: 15.9
Std nTPM: 138.2
Median nTPM: 240.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
648.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
642.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
623.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
571.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
550.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
547.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
524.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
521.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
505.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
492.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
476.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
474.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
470.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
449.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
442.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
427.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
425.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
424.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
423.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
418.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
409.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
409.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
408.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
402.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
398.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
394.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
378.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
375.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
373.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
371.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
370.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
356.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
355.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
346.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
344.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
342.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
338.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
332.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
328.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
326.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
323.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
321.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
321.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
320.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
319.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
315.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
312.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
304.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
302.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
296.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
286.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
286.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
285.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
280.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
280.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
277.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
275.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
272.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
269.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
269.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
262.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
260.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
260.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
258.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
258.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
256.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
256.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
256.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
255.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
253.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
253.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
252.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
252.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
251.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
250.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
248.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
231.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
231.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
227.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
221.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
219.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
216.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
215.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
210.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
207.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
193.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
192.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
192.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
190.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
189.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
189.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
187.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
187.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
185.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
183.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
183.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
183.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
180.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
180.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
178.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
176.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
173.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
172.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
168.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
167.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
166.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
164.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
162.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
154.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
153.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
152.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
150.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
148.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
144.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
142.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
142.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
138.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
132.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
132.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
132.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
131.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
125.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
123.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
120.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
114.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
110.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
110.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
109.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
108.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
106.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
106.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
105.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
103.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
94.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
89.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
88.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
77.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
76.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
75.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
75.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
66.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
62.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
58.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
58.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
57.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
56.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
45.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
44.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
34.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
34.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
15.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.2
Samples: 4
Max nTPM: 0.2
Min nTPM: 0.1
Sample A
Male
0.2
Sample B
Male
0.1
Sample C
Female
0.1
Sample D
Female
0.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.