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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
RNA expressioni 1
Consensus:48.4 nTPM
HPA:43.7 nTPM
GTEx:48.4 nTPM
FANTOM5:182.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB016394
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 43.7
overview Male, age 54 Colon sample 67
nTPM: 47.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 34.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 14.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 75.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 58.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 77.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 58.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 12.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 61.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 13.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 24.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 14.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 75.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 48.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 55.0
Samples: 373

Max nTPM: 347.0
Min nTPM: 5.9
Std nTPM: 43.8
Median nTPM: 43.3
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 347.0
GTEX-15UF7-1326-SM-7KUKV 40-49 years, male 246.3
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 196.1
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 195.3
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 194.2
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 192.2
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 188.3
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 183.6
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 179.9
GTEX-1CAMR-1026-SM-7P8QI 20-29 years, male 175.6
GTEX-14PN3-1926-SM-6EU1Y 60-69 years, female 171.1
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Colon - Transverse
Average nTPM: 42.3
Samples: 406

Max nTPM: 629.8
Min nTPM: 3.4
Std nTPM: 50.3
Median nTPM: 27.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 629.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 317.8
GTEX-1LGOU-1626-SM-D3LAK 20-29 years, female 314.9
GTEX-1AMEY-1926-SM-73KVT 30-39 years, female 193.2
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 188.9
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 180.0
GTEX-1HSMP-2326-SM-D3L8R 70-79 years, male 176.3
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 171.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 166.1
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 163.9
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 162.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 182.2
FF:10014-101C5 62,83,84 years, mixed 182.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.