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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
183.5
nTPM
HPA Brain:
125.6
nTPM
GTEx:
183.5
nTPM
FANTOM5:
57.6
Scaled Tags Per Million
Pig:
160.7
nTPM
Mouse:
26.4
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
125.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 93.6
2586
Male, age 75, left hemisphere
129.7
2828
Female, age 72, unknown
126.3
2666
Male, age 74, left hemisphere
99.3
1833
Male, age 53, unknown
96.9
1870
Female, age 42, unknown
96.1
1827
Male, age 72, unknown
88.8
1830
Male, age 51, unknown
87.5
2411
Female, age 72, unknown
81.4
2019
Male, age 18, unknown
69.5
2219
Male, age 76, both hemispheres
60.1
Dorsal raphe nucleus nTPM: 125.6
2016
Female, age 72, unknown
149.1
2047
Male, age 72, unknown
134.1
2298
Female, age 72, unknown
129.8
1828
Male, age 53, unknown
118.1
2750
Male, age 76, both hemispheres
97.1
Inferior colliculus nTPM: 105.5
2849
Male, age 72, unknown
112.4
1890
Male, age 53, unknown
108.6
1848
Female, age 42, unknown
104.8
2097
Female, age 72, unknown
96.5
Median raphe nucleus nTPM: 90.4
2220
Male, age 76, midline
90.4
Periaquaductal grey, anterior nTPM: 98.0
1795
Male, age 51, unknown
107.3
2502
Female, age 75, unknown
102.8
1947
Male, age 18, unknown
83.8
Periaquaductal grey, dorsal nTPM: 117.3
2850
Male, age 76, both hemispheres
142.1
1840
Male, age 53, unknown
121.7
1831
Male, age 72, unknown
104.5
2464
Female, age 72, unknown
100.8
Periaquaductal grey, lateral nTPM: 115.6
2140
Male, age 76, both hemispheres
128.2
2053
Male, age 18, unknown
118.1
2272
Male, age 74, both hemispheres
100.5
Pretectal area nTPM: 92.4
2825
Male, age 18, unknown
116.8
2224
Female, age 72, unknown
112.7
2273
Male, age 74, both hemispheres
105.4
2316
Male, age 76, right hemisphere
101.2
2667
Female, age 75, unknown
94.0
1817
Female, age 42, unknown
93.5
1815
Male, age 53, unknown
89.4
1944
Female, age 72, unknown
86.5
1816
Male, age 51, unknown
75.3
2407
Male, age 75, both hemispheres
75.1
2007
Male, age 72, unknown
67.0
Red nucleus nTPM: 102.5
2227
Male, age 72, unknown
115.0
1821
Female, age 72, unknown
114.5
2769
Male, age 72, unknown
114.2
1954
Female, age 42, unknown
112.4
2503
Female, age 72, unknown
107.8
1865
Male, age 51, unknown
107.7
1904
Male, age 53, unknown
107.6
2823
Male, age 76, right hemisphere
105.8
2588
Male, age 74, left hemisphere
99.0
2725
Female, age 75, unknown
98.0
2785
Male, age 18, unknown
75.9
2584
Male, age 75, left hemisphere
72.2
Substantia nigra nTPM: 115.5
2699
Male, age 18, unknown
188.6
1916
Female, age 42, unknown
136.0
2665
Male, age 74, both hemispheres
135.0
1851
Male, age 51, unknown
124.9
2590
Female, age 75, unknown
103.6
2583
Male, age 75, right hemisphere
99.1
2409
Female, age 72, unknown
98.5
2241
Male, age 72, unknown
91.8
1941
Male, age 53, unknown
88.7
1889
Female, age 72, unknown
88.5
Superior colliculus nTPM: 96.6
1995
Male, age 72, unknown
124.1
1913
Female, age 42, unknown
102.7
2587
Male, age 74, left hemisphere
101.5
2668
Female, age 75, unknown
98.9
1796
Male, age 53, unknown
98.3
2087
Female, age 72, unknown
94.4
1839
Male, age 51, unknown
90.8
2261
Male, age 18, unknown
88.3
2664
Male, age 75, both hemispheres
83.9
1895
Male, age 76, right hemisphere
83.0
Ventral tegmental area nTPM: 111.9
1915
Female, age 42, unknown
130.0
2021
Male, age 53, unknown
121.5
1942
Male, age 51, unknown
114.1
2410
Female, age 72, unknown
106.8
2218
Male, age 76, both hemispheres
100.4
2223
Female, age 72, unknown
98.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
183.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 183.5
Samples: 139
Max nTPM: 645.8
Min nTPM: 29.9
Std nTPM: 85.6
Median nTPM: 160.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
645.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
454.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
415.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
415.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
410.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
381.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
351.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
334.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
328.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
316.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
316.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
308.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
307.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
307.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
296.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
268.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
268.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
266.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
264.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
255.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
254.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
252.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
247.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
243.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
239.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
239.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
237.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
235.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
226.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
220.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
220.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
219.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
219.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
218.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
217.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
215.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
214.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
213.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
212.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
210.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
209.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
205.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
202.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
201.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
201.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
193.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
193.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
191.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
190.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
185.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
185.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
185.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
177.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
177.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
173.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
172.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
172.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
170.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
170.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
169.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
169.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
166.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
165.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
164.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
164.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
164.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
163.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
163.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
161.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
160.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
160.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
159.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
158.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
158.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
157.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
156.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
156.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
155.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
154.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
153.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
151.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
150.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
149.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
149.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
148.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
148.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
147.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
147.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
146.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
144.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
144.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
143.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
142.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
141.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
140.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
140.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
139.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
138.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
138.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
136.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
134.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
132.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
132.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
131.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
131.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
130.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
130.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
129.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
129.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
127.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
125.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
124.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
124.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
123.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
123.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
122.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
119.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
117.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
116.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
115.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
114.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
111.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
110.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
110.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
109.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
102.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
102.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
101.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
98.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
86.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
85.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
85.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
83.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
80.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
70.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
68.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
67.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
62.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
29.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
26.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 26.5
Samples: 4
Max nTPM: 28.2
Min nTPM: 23.5
Sample A
Male
28.2
Sample B
Male
27.6
Sample C
Female
23.5
Sample D
Female
26.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.