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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
294.7
nTPM
HPA Brain:
104.8
nTPM
GTEx:
294.7
nTPM
FANTOM5:
129.1
Scaled Tags Per Million
Pig:
15.3
nTPM
Mouse:
915.8
nTPM
Allen mouse:
2.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
104.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 87.1
2019
Male, age 18, unknown
116.3
2411
Female, age 72, unknown
103.7
1827
Male, age 72, unknown
95.4
2219
Male, age 76, both hemispheres
89.1
1870
Female, age 42, unknown
87.5
2586
Male, age 75, left hemisphere
85.7
2666
Male, age 74, left hemisphere
79.4
1833
Male, age 53, unknown
76.0
1830
Male, age 51, unknown
69.4
2828
Female, age 72, unknown
68.0
Dorsal raphe nucleus nTPM: 90.5
2298
Female, age 72, unknown
114.1
1828
Male, age 53, unknown
97.4
2047
Male, age 72, unknown
88.3
2750
Male, age 76, both hemispheres
85.6
2016
Female, age 72, unknown
67.0
Inferior colliculus nTPM: 96.2
2097
Female, age 72, unknown
117.1
1890
Male, age 53, unknown
92.4
1848
Female, age 42, unknown
92.1
2849
Male, age 72, unknown
83.1
Median raphe nucleus nTPM: 84.8
2220
Male, age 76, midline
84.8
Periaquaductal grey, anterior nTPM: 88.7
1947
Male, age 18, unknown
92.0
1795
Male, age 51, unknown
88.0
2502
Female, age 75, unknown
86.1
Periaquaductal grey, dorsal nTPM: 74.0
1840
Male, age 53, unknown
83.4
2464
Female, age 72, unknown
74.1
2850
Male, age 76, both hemispheres
70.6
1831
Male, age 72, unknown
67.8
Periaquaductal grey, lateral nTPM: 69.7
2272
Male, age 74, both hemispheres
75.2
2053
Male, age 18, unknown
70.6
2140
Male, age 76, both hemispheres
63.3
Pretectal area nTPM: 101.6
2007
Male, age 72, unknown
148.9
1816
Male, age 51, unknown
134.1
1817
Female, age 42, unknown
132.9
1944
Female, age 72, unknown
112.5
1815
Male, age 53, unknown
109.4
2667
Female, age 75, unknown
94.6
2224
Female, age 72, unknown
89.2
2273
Male, age 74, both hemispheres
75.5
2316
Male, age 76, right hemisphere
74.5
2825
Male, age 18, unknown
73.3
2407
Male, age 75, both hemispheres
73.0
Red nucleus nTPM: 91.8
1821
Female, age 72, unknown
138.1
2725
Female, age 75, unknown
100.4
2785
Male, age 18, unknown
98.5
2588
Male, age 74, left hemisphere
93.7
2503
Female, age 72, unknown
90.1
1865
Male, age 51, unknown
89.2
2227
Male, age 72, unknown
84.3
2584
Male, age 75, left hemisphere
83.1
2769
Male, age 72, unknown
82.2
2823
Male, age 76, right hemisphere
82.2
1904
Male, age 53, unknown
81.3
1954
Female, age 42, unknown
77.9
Substantia nigra nTPM: 104.8
1851
Male, age 51, unknown
122.5
1916
Female, age 42, unknown
119.0
1889
Female, age 72, unknown
117.4
2241
Male, age 72, unknown
113.2
1941
Male, age 53, unknown
109.7
2665
Male, age 74, both hemispheres
109.0
2409
Female, age 72, unknown
101.2
2590
Female, age 75, unknown
89.5
2699
Male, age 18, unknown
89.0
2583
Male, age 75, right hemisphere
77.9
Superior colliculus nTPM: 86.2
1796
Male, age 53, unknown
100.7
1895
Male, age 76, right hemisphere
97.5
2668
Female, age 75, unknown
96.1
2087
Female, age 72, unknown
93.4
2261
Male, age 18, unknown
86.4
2587
Male, age 74, left hemisphere
83.5
2664
Male, age 75, both hemispheres
80.7
1839
Male, age 51, unknown
77.3
1913
Female, age 42, unknown
76.2
1995
Male, age 72, unknown
69.8
Ventral tegmental area nTPM: 93.8
2410
Female, age 72, unknown
113.8
1915
Female, age 42, unknown
108.9
2223
Female, age 72, unknown
99.4
2218
Male, age 76, both hemispheres
89.7
1942
Male, age 51, unknown
80.6
2021
Male, age 53, unknown
70.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
294.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 294.7
Samples: 139
Max nTPM: 739.2
Min nTPM: 125.5
Std nTPM: 107.4
Median nTPM: 273.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
739.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
676.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
669.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
588.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
529.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
508.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
501.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
500.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
497.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
490.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
471.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
469.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
462.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
449.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
432.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
431.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
417.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
399.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
395.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
391.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
385.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
381.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
379.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
377.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
366.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
357.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
357.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
351.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
351.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
345.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
344.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
343.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
339.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
338.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
338.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
337.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
336.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
332.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
330.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
329.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
329.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
324.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
322.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
321.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
319.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
314.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
314.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
313.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
310.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
310.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
307.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
303.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
302.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
302.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
300.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
300.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
297.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
294.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
293.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
290.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
288.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
286.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
285.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
284.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
283.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
280.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
280.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
279.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
274.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
273.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
269.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
268.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
267.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
266.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
261.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
261.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
259.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
258.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
258.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
258.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
255.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
253.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
249.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
246.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
246.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
245.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
240.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
240.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
239.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
238.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
238.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
236.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
235.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
234.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
228.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
226.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
225.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
224.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
224.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
224.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
223.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
223.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
219.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
218.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
215.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
215.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
212.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
212.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
212.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
210.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
210.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
207.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
207.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
205.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
205.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
204.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
201.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
200.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
198.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
196.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
196.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
195.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
193.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
193.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
192.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
185.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
184.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
183.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
180.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
178.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
176.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
175.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
174.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
172.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
168.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
167.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
153.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
151.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
125.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
915.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 915.8
Samples: 4
Max nTPM: 977.0
Min nTPM: 868.3
Sample A
Male
934.2
Sample B
Male
868.3
Sample C
Female
883.7
Sample D
Female
977.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.