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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.2
nTPM
HPA Brain:
74.3
nTPM
GTEx:
55.2
nTPM
FANTOM5:
212.3
Scaled Tags Per Million
Pig:
119.5
nTPM
Mouse:
102.2
nTPM
Allen mouse:
0.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
74.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 53.0
1870
Female, age 42, unknown
68.6
2411
Female, age 72, unknown
57.9
2828
Female, age 72, unknown
57.8
1827
Male, age 72, unknown
57.6
2019
Male, age 18, unknown
54.7
2586
Male, age 75, left hemisphere
48.4
2666
Male, age 74, left hemisphere
48.4
1830
Male, age 51, unknown
48.2
1833
Male, age 53, unknown
46.1
2219
Male, age 76, both hemispheres
42.5
Dorsal raphe nucleus nTPM: 67.5
2047
Male, age 72, unknown
79.0
2298
Female, age 72, unknown
71.2
1828
Male, age 53, unknown
65.9
2750
Male, age 76, both hemispheres
61.0
2016
Female, age 72, unknown
60.1
Inferior colliculus nTPM: 58.0
1890
Male, age 53, unknown
63.2
2097
Female, age 72, unknown
62.0
2849
Male, age 72, unknown
53.5
1848
Female, age 42, unknown
53.2
Median raphe nucleus nTPM: 74.3
2220
Male, age 76, midline
74.3
Periaquaductal grey, anterior nTPM: 58.3
1947
Male, age 18, unknown
60.7
2502
Female, age 75, unknown
57.9
1795
Male, age 51, unknown
56.1
Periaquaductal grey, dorsal nTPM: 59.0
2850
Male, age 76, both hemispheres
71.2
1840
Male, age 53, unknown
60.0
1831
Male, age 72, unknown
53.5
2464
Female, age 72, unknown
51.3
Periaquaductal grey, lateral nTPM: 61.3
2140
Male, age 76, both hemispheres
65.7
2053
Male, age 18, unknown
62.5
2272
Male, age 74, both hemispheres
55.8
Pretectal area nTPM: 58.3
2667
Female, age 75, unknown
67.7
2273
Male, age 74, both hemispheres
67.0
1817
Female, age 42, unknown
64.6
2224
Female, age 72, unknown
61.2
1815
Male, age 53, unknown
57.3
1944
Female, age 72, unknown
57.3
2007
Male, age 72, unknown
55.9
1816
Male, age 51, unknown
55.1
2407
Male, age 75, both hemispheres
53.9
2825
Male, age 18, unknown
52.4
2316
Male, age 76, right hemisphere
49.4
Red nucleus nTPM: 60.2
1865
Male, age 51, unknown
72.3
1821
Female, age 72, unknown
66.8
1954
Female, age 42, unknown
63.9
2769
Male, age 72, unknown
63.9
2725
Female, age 75, unknown
62.3
1904
Male, age 53, unknown
62.0
2823
Male, age 76, right hemisphere
61.3
2503
Female, age 72, unknown
60.5
2227
Male, age 72, unknown
58.7
2785
Male, age 18, unknown
52.1
2584
Male, age 75, left hemisphere
50.4
2588
Male, age 74, left hemisphere
48.4
Substantia nigra nTPM: 66.6
1916
Female, age 42, unknown
94.8
2699
Male, age 18, unknown
80.2
1851
Male, age 51, unknown
74.8
2409
Female, age 72, unknown
64.9
2665
Male, age 74, both hemispheres
62.9
1889
Female, age 72, unknown
62.2
1941
Male, age 53, unknown
61.7
2590
Female, age 75, unknown
59.7
2241
Male, age 72, unknown
55.8
2583
Male, age 75, right hemisphere
49.1
Superior colliculus nTPM: 55.4
2587
Male, age 74, left hemisphere
69.8
1796
Male, age 53, unknown
59.6
1995
Male, age 72, unknown
58.9
1913
Female, age 42, unknown
56.9
2664
Male, age 75, both hemispheres
53.3
1839
Male, age 51, unknown
53.0
2087
Female, age 72, unknown
52.5
2261
Male, age 18, unknown
51.6
2668
Female, age 75, unknown
50.2
1895
Male, age 76, right hemisphere
48.6
Ventral tegmental area nTPM: 64.2
1915
Female, age 42, unknown
74.4
2410
Female, age 72, unknown
70.0
2021
Male, age 53, unknown
63.5
2223
Female, age 72, unknown
61.9
2218
Male, age 76, both hemispheres
58.1
1942
Male, age 51, unknown
57.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 55.2
Samples: 139
Max nTPM: 107.0
Min nTPM: 25.7
Std nTPM: 13.8
Median nTPM: 53.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
107.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
88.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
87.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
85.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
85.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
85.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
81.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
80.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
77.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
77.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
76.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
76.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
75.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
75.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
74.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
73.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
72.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
70.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
67.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
66.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
66.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
66.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
66.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
65.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
65.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
65.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
65.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
64.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
64.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
63.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
63.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
63.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
63.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
63.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
63.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
62.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
62.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
62.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
61.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
61.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
61.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
61.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
61.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
61.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
61.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
60.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
59.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
59.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
59.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
58.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
58.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
58.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
57.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
56.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
56.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
55.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
55.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
55.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
55.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
55.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
55.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
55.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
54.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
54.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
54.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
54.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
54.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
54.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
53.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
53.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
53.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
53.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
53.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
53.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
53.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
52.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
52.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
52.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
52.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
52.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
52.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
51.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
51.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
50.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
50.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
50.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
50.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
50.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
49.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
49.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
49.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
49.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
49.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
48.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
48.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
48.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
47.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
47.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
47.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
46.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
46.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
46.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
46.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
45.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
45.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
45.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
45.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
45.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
45.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
45.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
44.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
44.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
44.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
44.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
43.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
43.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
42.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
41.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
41.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
40.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
40.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
39.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
37.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
37.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
36.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
36.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
36.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
35.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
35.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
35.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
35.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
35.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
34.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
34.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
32.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
27.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
27.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
25.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
102.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 102.2
Samples: 4
Max nTPM: 111.9
Min nTPM: 93.6
Sample A
Male
111.9
Sample B
Male
100.4
Sample C
Female
93.6
Sample D
Female
102.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.