We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Medium
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
729.8
nTPM
HPA Brain:
270.7
nTPM
GTEx:
729.8
nTPM
FANTOM5:
62.1
Scaled Tags Per Million
Mouse:
423.0
nTPM
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA069064
Glial cells
Medium
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
270.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 270.7
2529
Female, age 94, left hemisphere
287.2
1898
Male, age 80, left hemisphere
286.5
1855
Male, age 76, left hemisphere
282.4
2621
Female, age 67, right hemisphere
272.9
1911
Female, age 85, right hemisphere
250.6
2148
Female, age 91, left hemisphere
244.7
Dentate gyrus nTPM: 269.0
2530
Female, age 94, left hemisphere
304.8
2010
Male, age 76, both hemispheres
287.6
2246
Female, age 85, both hemispheres
279.7
2531
Female, age 67, both hemispheres
264.4
2528
Male, age 74, both hemispheres
252.3
1927
Female, age 91, both hemispheres
225.2
Entorhinal gyrus nTPM: 248.7
1787
Male, age 76, left hemisphere
271.5
2117
Female, age 91, right hemisphere
270.0
2686
Male, age 75, right hemisphere
263.9
2764
Male, age 80, right hemisphere
253.1
1938
Female, age 85, left hemisphere
241.4
2613
Female, age 94, left hemisphere
192.3
Hippocampus, CA1 nTPM: 257.3
2045
Male, age 76, both hemispheres
267.6
2082
Female, age 91, right hemisphere
262.1
2749
Male, age 80, left hemisphere
254.2
1873
Female, age 85, both hemispheres
253.9
2527
Male, age 74, both hemispheres
248.6
Hippocampus, CA2 nTPM: 251.9
1963
Male, age 80, left hemisphere
272.8
1892
Male, age 76, both hemispheres
257.3
2113
Female, age 91, right hemisphere
253.3
2437
Female, age 94, left hemisphere
243.7
1940
Female, age 85, left hemisphere
242.6
2249
Male, age 74, both hemispheres
241.7
Hippocampus, CA3 nTPM: 236.8
1867
Male, age 76, both hemispheres
274.9
2861
Female, age 67, both hemispheres
258.4
1891
Female, age 85, both hemispheres
253.0
2137
Male, age 80, left hemisphere
230.9
2436
Male, age 74, both hemispheres
208.8
2620
Female, age 94, left hemisphere
194.6
Parahippocampal cortex nTPM: 236.5
2018
Male, age 76, both hemispheres
309.7
2245
Female, age 91, both hemispheres
260.6
2250
Female, age 67, right hemisphere
255.8
2532
Female, age 72, left hemisphere
244.4
1990
Female, age 91, right hemisphere
239.3
1933
Female, age 85, both hemispheres
237.1
1850
Male, age 80, both hemispheres
229.3
2692
Male, age 74, both hemispheres
220.5
2622
Female, age 67, right hemisphere
205.5
2693
Female, age 94, both hemispheres
162.8
Perirhinal gyrus nTPM: 244.0
1847
Female, age 91, left hemisphere
259.2
1794
Male, age 80, right hemisphere
257.3
1841
Female, age 85, right hemisphere
250.6
2521
Female, age 94, right hemisphere
236.0
2848
Male, age 76, right hemisphere
216.8
Subiculum nTPM: 261.5
2042
Male, age 76, both hemispheres
298.4
1977
Female, age 85, both hemispheres
274.8
2438
Female, age 94, left hemisphere
266.4
2729
Female, age 91, right hemisphere
251.8
1901
Male, age 80, both hemispheres
251.5
2619
Male, age 74, both hemispheres
225.9
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
729.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 729.8
Samples: 197
Max nTPM: 1618.4
Min nTPM: 390.3
Std nTPM: 213.0
Median nTPM: 689.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
1618.4
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
1544.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1399.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1288.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
1278.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
1252.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1234.1
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
1217.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1161.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1156.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1148.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
1145.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
1143.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1139.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1116.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1104.1
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1058.8
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1039.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1026.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1018.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1003.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
999.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
998.4
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
981.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
981.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
963.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
958.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
957.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
955.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
946.3
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
944.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
932.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
932.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
915.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
888.5
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
888.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
876.6
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
876.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
857.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
854.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
846.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
841.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
836.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
836.1
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
835.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
831.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
831.3
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
828.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
828.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
827.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
826.9
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
817.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
816.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
811.0
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
805.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
800.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
798.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
797.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
794.1
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
789.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
784.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
783.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
783.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
770.4
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
762.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
760.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
760.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
757.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
751.4
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
751.4
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
749.8
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
746.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
740.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
739.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
738.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
734.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
730.9
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
729.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
728.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
727.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
726.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
723.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
721.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
721.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
718.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
717.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
714.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
713.7
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
705.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
698.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
698.6
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
698.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
698.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
696.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
696.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
693.1
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
691.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
689.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
689.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
687.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
686.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
686.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
683.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
682.4
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
678.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
664.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
664.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
664.1
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
662.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
661.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
657.2
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
653.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
652.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
652.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
649.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
646.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
643.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
641.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
638.7
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
632.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
631.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
628.6
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
628.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
627.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
627.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
626.7
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
624.9
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
617.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
616.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
614.0
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
612.4
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
607.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
607.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
607.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
606.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
604.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
600.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
599.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
591.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
586.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
581.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
580.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
577.4
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
576.2
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
574.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
573.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
573.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
572.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
571.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
571.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
567.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
567.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
564.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
562.2
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
561.7
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
559.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
554.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
550.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
549.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
548.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
546.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
543.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
543.2
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
542.6
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
541.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
540.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
537.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
536.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
535.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
534.9
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
531.7
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
530.3
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
529.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
527.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
525.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
521.1
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
510.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
507.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
507.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
505.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
500.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
500.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
496.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
494.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
494.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
493.0
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
491.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
489.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
488.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
478.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
477.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
468.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
462.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
459.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
432.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
422.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
390.3
Show allShow less
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.