SNED1

GENERAL INFORMATION

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Gene name

SNED1

Gene description

Sushi, nidogen and EGF-like domains 1

Protein class

Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

7
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Mixed
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

General cytoplasmic and membranous expression.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 2 antibodies.
HPA036414 , HPA036415
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Mixed

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

SNED1 (HGNC Symbol)

Synonyms

FLJ00133, Snep, SST3

Description

Sushi, nidogen and EGF-like domains 1 (HGNC Symbol)

Entrez gene summary

Chromosome

2

Cytoband

q37.3

Chromosome location (bp)

240998838 - 241095568

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000162804 (version 78.38)

Entrez gene

25992

UniProt

Q8TER0 (UniProt - Evidence at transcript level)

neXtProt

NX_Q8TER0

Antibodypedia

SNED1 antibodies


PROTEIN BROWSER

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ENST00000310397
 
ENST00000342631
 
ENST00000401644
 
ENST00000401884
 
ENST00000405547
 
ENST00000420591
 
ENST00000431690
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SNED1-001 ENSP00000308893
ENST00000310397
Q8TER0
Show all »
Show » Show » 1413 152.2 Yes 0
SNED1-004 ENSP00000386007
ENST00000405547
Q8TER0
Show all »
Show » Show » 1352 145.3 Yes 0
SNED1-005 ENSP00000384871
ENST00000401884
Q8TER0
Show all »
Show » Show » 1324 142.1 Yes 0
SNED1-008 ENSP00000384789
ENST00000401644
Show » Show » 300 31.4 No 0
SNED1-009 ENSP00000401865
ENST00000431690
Show » Show » 272 28.4 No 0
SNED1-013 ENSP00000394324
ENST00000420591
H7C0D4
Show all »
Show » Show » 66 6.8 No 0
SNED1-201 ENSP00000342992
ENST00000342631
Show » Show » 599 65.2 No 0