HPGDS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.6 FPKM
GTEx:1.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA024035

 

Endothelial cells

Not detected  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

4.6

overview Male, age 54
Sample 1
FPKM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 3.3
Min RPKM: 0
Std RPKM: 0.6
Median RPKM: 0.8
GTEX-ZVZQ-2626-SM-59HLB 3.3
GTEX-YEC3-2026-SM-4WWFL 2.9
GTEX-139D8-2926-SM-5IJBM 2.9
GTEX-139TS-2226-SM-5J2N1 2.8
GTEX-1477Z-2126-SM-5Q5CM 2.8
GTEX-11PRG-2026-SM-5GU5F 2.6
GTEX-11DXZ-1626-SM-5GIDI 2.6
GTEX-11P81-1426-SM-5P9JN 2.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.9
Samples: 196

Max RPKM: 7.9
Min RPKM: 0.1
Std RPKM: 1.2
Median RPKM: 1.7
GTEX-13FHP-2426-SM-5KLZ5 7.9
GTEX-11O72-2226-SM-5PNW2 7.3
GTEX-139TS-1926-SM-5IJFO 5.4
GTEX-14BMV-2426-SM-5S2PP 5.4
GTEX-111VG-2226-SM-5N9DU 5.4
GTEX-12KS4-2426-SM-5LU8P 5.3
GTEX-1399R-2226-SM-5P9JB 5.2
GTEX-ZXES-1626-SM-5NQ7L 4.9
Show all