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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
262.5
nTPM
HPA Brain:
99.0
nTPM
GTEx:
262.5
nTPM
FANTOM5:
233.0
Scaled Tags Per Million
Mouse:
0.0
nTPM
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
99.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 79.5
2666
Male, age 74, left hemisphere
91.9
1870
Female, age 42, unknown
89.7
1827
Male, age 72, unknown
81.7
1833
Male, age 53, unknown
80.0
2828
Female, age 72, unknown
78.6
1830
Male, age 51, unknown
76.6
2019
Male, age 18, unknown
75.9
2586
Male, age 75, left hemisphere
75.2
2411
Female, age 72, unknown
73.7
2219
Male, age 76, both hemispheres
71.2
Dorsal raphe nucleus nTPM: 72.4
1828
Male, age 53, unknown
76.7
2750
Male, age 76, both hemispheres
75.3
2047
Male, age 72, unknown
72.6
2016
Female, age 72, unknown
69.1
2298
Female, age 72, unknown
68.2
Inferior colliculus nTPM: 82.6
2849
Male, age 72, unknown
91.5
1890
Male, age 53, unknown
89.2
1848
Female, age 42, unknown
77.1
2097
Female, age 72, unknown
72.7
Median raphe nucleus nTPM: 99.0
2220
Male, age 76, midline
99.0
Periaquaductal grey, anterior nTPM: 74.4
2502
Female, age 75, unknown
80.9
1947
Male, age 18, unknown
72.6
1795
Male, age 51, unknown
69.8
Periaquaductal grey, dorsal nTPM: 78.4
2850
Male, age 76, both hemispheres
91.7
1840
Male, age 53, unknown
81.7
1831
Male, age 72, unknown
76.3
2464
Female, age 72, unknown
64.0
Periaquaductal grey, lateral nTPM: 71.1
2140
Male, age 76, both hemispheres
81.0
2053
Male, age 18, unknown
76.3
2272
Male, age 74, both hemispheres
56.1
Pretectal area nTPM: 76.2
1817
Female, age 42, unknown
90.5
1816
Male, age 51, unknown
89.6
1815
Male, age 53, unknown
84.7
2825
Male, age 18, unknown
83.8
1944
Female, age 72, unknown
82.6
2007
Male, age 72, unknown
77.8
2407
Male, age 75, both hemispheres
76.5
2667
Female, age 75, unknown
67.9
2224
Female, age 72, unknown
67.1
2316
Male, age 76, right hemisphere
64.8
2273
Male, age 74, both hemispheres
52.6
Red nucleus nTPM: 90.3
2503
Female, age 72, unknown
111.3
2725
Female, age 75, unknown
98.0
2584
Male, age 75, left hemisphere
96.6
1865
Male, age 51, unknown
95.3
2588
Male, age 74, left hemisphere
92.1
1821
Female, age 72, unknown
90.3
2769
Male, age 72, unknown
86.7
2785
Male, age 18, unknown
83.6
2823
Male, age 76, right hemisphere
83.4
2227
Male, age 72, unknown
82.7
1954
Female, age 42, unknown
82.0
1904
Male, age 53, unknown
81.9
Substantia nigra nTPM: 91.7
1916
Female, age 42, unknown
105.0
2409
Female, age 72, unknown
101.2
2699
Male, age 18, unknown
100.0
2665
Male, age 74, both hemispheres
98.7
1851
Male, age 51, unknown
94.5
1889
Female, age 72, unknown
93.6
2241
Male, age 72, unknown
87.8
1941
Male, age 53, unknown
84.8
2590
Female, age 75, unknown
83.0
2583
Male, age 75, right hemisphere
68.1
Superior colliculus nTPM: 81.0
2587
Male, age 74, left hemisphere
97.7
1913
Female, age 42, unknown
91.3
1895
Male, age 76, right hemisphere
84.8
2668
Female, age 75, unknown
82.6
1796
Male, age 53, unknown
81.8
1995
Male, age 72, unknown
80.8
1839
Male, age 51, unknown
76.9
2087
Female, age 72, unknown
75.4
2261
Male, age 18, unknown
69.8
2664
Male, age 75, both hemispheres
69.3
Ventral tegmental area nTPM: 84.9
2223
Female, age 72, unknown
96.9
1915
Female, age 42, unknown
93.5
2218
Male, age 76, both hemispheres
91.2
2410
Female, age 72, unknown
81.9
1942
Male, age 51, unknown
74.2
2021
Male, age 53, unknown
71.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
262.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 262.5
Samples: 139
Max nTPM: 807.9
Min nTPM: 133.5
Std nTPM: 93.0
Median nTPM: 242.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
807.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
682.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
514.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
474.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
425.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
411.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
403.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
397.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
391.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
391.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
379.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
378.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
371.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
364.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
357.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
356.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
355.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
354.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
353.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
347.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
344.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
343.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
342.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
337.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
337.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
331.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
323.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
321.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
320.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
319.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
315.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
312.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
302.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
302.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
300.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
296.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
296.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
292.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
289.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
286.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
281.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
281.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
280.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
280.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
278.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
277.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
276.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
276.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
274.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
272.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
270.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
265.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
264.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
264.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
262.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
260.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
255.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
255.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
255.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
254.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
254.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
250.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
249.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
248.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
247.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
246.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
246.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
246.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
244.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
242.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
242.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
239.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
239.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
238.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
237.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
237.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
237.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
237.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
236.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
235.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
233.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
232.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
230.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
230.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
229.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
226.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
225.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
224.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
223.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
221.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
219.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
218.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
217.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
216.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
216.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
213.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
211.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
211.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
211.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
211.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
210.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
210.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
208.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
208.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
204.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
203.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
203.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
201.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
199.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
196.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
194.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
192.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
192.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
192.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
191.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
191.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
190.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
190.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
183.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
180.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
180.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
179.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
176.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
176.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
174.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
174.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
171.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
165.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
161.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
154.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
153.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
152.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
150.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
150.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
149.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
147.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
147.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
134.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
133.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.