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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
333.5
nTPM
HPA Brain:
575.8
nTPM
GTEx:
333.5
nTPM
FANTOM5:
282.0
Scaled Tags Per Million
Pig:
202.9
nTPM
Mouse:
23.7
nTPM
Allen mouse:
0.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
575.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 397.2
1830
Male, age 51, unknown
517.8
1833
Male, age 53, unknown
513.7
2411
Female, age 72, unknown
475.1
1870
Female, age 42, unknown
454.1
2019
Male, age 18, unknown
435.5
2828
Female, age 72, unknown
402.6
2666
Male, age 74, left hemisphere
330.5
2586
Male, age 75, left hemisphere
313.7
2219
Male, age 76, both hemispheres
278.7
1827
Male, age 72, unknown
250.4
Dorsal raphe nucleus nTPM: 277.1
2750
Male, age 76, both hemispheres
552.0
2016
Female, age 72, unknown
283.0
1828
Male, age 53, unknown
253.6
2047
Male, age 72, unknown
157.9
2298
Female, age 72, unknown
139.1
Inferior colliculus nTPM: 251.5
2849
Male, age 72, unknown
308.4
1848
Female, age 42, unknown
259.4
1890
Male, age 53, unknown
255.4
2097
Female, age 72, unknown
183.0
Median raphe nucleus nTPM: 243.8
2220
Male, age 76, midline
243.8
Periaquaductal grey, anterior nTPM: 171.6
1947
Male, age 18, unknown
187.6
1795
Male, age 51, unknown
167.0
2502
Female, age 75, unknown
160.1
Periaquaductal grey, dorsal nTPM: 158.6
2464
Female, age 72, unknown
259.5
1831
Male, age 72, unknown
181.0
2850
Male, age 76, both hemispheres
102.4
1840
Male, age 53, unknown
91.5
Periaquaductal grey, lateral nTPM: 170.7
2272
Male, age 74, both hemispheres
235.0
2053
Male, age 18, unknown
188.5
2140
Male, age 76, both hemispheres
88.5
Pretectal area nTPM: 228.9
1815
Male, age 53, unknown
346.1
2316
Male, age 76, right hemisphere
338.2
1817
Female, age 42, unknown
293.6
2007
Male, age 72, unknown
272.0
2407
Male, age 75, both hemispheres
268.6
2825
Male, age 18, unknown
255.5
2273
Male, age 74, both hemispheres
182.7
2224
Female, age 72, unknown
164.7
1944
Female, age 72, unknown
140.2
1816
Male, age 51, unknown
130.9
2667
Female, age 75, unknown
125.4
Red nucleus nTPM: 575.8
2823
Male, age 76, right hemisphere
765.2
1904
Male, age 53, unknown
645.0
2769
Male, age 72, unknown
644.3
1821
Female, age 72, unknown
639.9
2227
Male, age 72, unknown
622.5
1865
Male, age 51, unknown
612.9
2503
Female, age 72, unknown
561.5
1954
Female, age 42, unknown
548.9
2785
Male, age 18, unknown
537.5
2588
Male, age 74, left hemisphere
489.9
2725
Female, age 75, unknown
482.2
2584
Male, age 75, left hemisphere
360.3
Substantia nigra nTPM: 256.5
2583
Male, age 75, right hemisphere
365.1
2590
Female, age 75, unknown
346.1
1889
Female, age 72, unknown
310.9
1851
Male, age 51, unknown
292.3
2699
Male, age 18, unknown
269.1
2665
Male, age 74, both hemispheres
212.1
1941
Male, age 53, unknown
209.1
1916
Female, age 42, unknown
207.7
2409
Female, age 72, unknown
205.3
2241
Male, age 72, unknown
147.3
Superior colliculus nTPM: 320.6
1995
Male, age 72, unknown
483.8
2668
Female, age 75, unknown
457.8
1913
Female, age 42, unknown
425.8
1895
Male, age 76, right hemisphere
376.4
2587
Male, age 74, left hemisphere
355.1
1839
Male, age 51, unknown
336.1
1796
Male, age 53, unknown
246.8
2664
Male, age 75, both hemispheres
187.5
2087
Female, age 72, unknown
172.8
2261
Male, age 18, unknown
164.4
Ventral tegmental area nTPM: 307.9
2223
Female, age 72, unknown
446.9
2410
Female, age 72, unknown
349.7
2218
Male, age 76, both hemispheres
279.4
1942
Male, age 51, unknown
261.4
2021
Male, age 53, unknown
259.5
1915
Female, age 42, unknown
250.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
333.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 333.5
Samples: 139
Max nTPM: 1349.8
Min nTPM: 61.1
Std nTPM: 225.7
Median nTPM: 263.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1349.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1329.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1237.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1103.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1084.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
698.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
683.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
643.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
640.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
632.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
601.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
592.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
589.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
573.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
552.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
549.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
545.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
522.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
519.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
513.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
512.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
501.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
501.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
497.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
480.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
476.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
463.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
450.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
444.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
444.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
432.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
431.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
428.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
427.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
425.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
403.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
396.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
396.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
392.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
390.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
388.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
383.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
382.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
365.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
357.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
355.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
351.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
346.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
346.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
346.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
345.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
344.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
341.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
335.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
334.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
332.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
330.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
315.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
311.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
302.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
302.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
298.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
292.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
292.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
289.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
289.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
286.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
284.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
273.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
263.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
261.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
259.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
257.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
257.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
255.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
250.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
250.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
249.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
247.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
246.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
243.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
243.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
239.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
238.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
232.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
228.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
227.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
227.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
221.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
221.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
219.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
215.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
212.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
211.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
206.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
205.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
204.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
203.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
201.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
199.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
198.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
197.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
196.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
196.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
195.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
190.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
188.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
188.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
185.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
183.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
182.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
178.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
176.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
168.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
167.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
167.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
167.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
158.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
156.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
155.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
154.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
152.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
150.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
143.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
138.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
137.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
136.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
126.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
121.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
111.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
106.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
104.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
95.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
90.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
89.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
86.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
83.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
80.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
61.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 23.7
Samples: 4
Max nTPM: 29.7
Min nTPM: 18.4
Sample A
Male
29.7
Sample B
Male
18.4
Sample C
Female
22.8
Sample D
Female
23.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.