APLF

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.4 FPKM
GTEx:0.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029396

 

Antibody HPA034642

 

Antibody HPA034643

 

Endothelial cells

High   Medium   Not detected  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Not available   High   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

0.4

overview Male, age 54
Sample 1
FPKM: 0.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 1.5
Min RPKM: 0.4
Std RPKM: 0.2
Median RPKM: 0.9
GTEX-13CF2-1826-SM-5N9GK 1.5
GTEX-11GS4-1826-SM-5HL4T 1.5
GTEX-13N2G-2226-SM-5IJCU 1.5
GTEX-1477Z-2126-SM-5Q5CM 1.5
GTEX-ZE7O-2626-SM-51MSS 1.4
GTEX-13G51-2126-SM-5IJD9 1.4
GTEX-13OW5-2826-SM-5KM1G 1.3
GTEX-146FH-2426-SM-5Q5EW 1.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.5
Samples: 196

Max RPKM: 1.5
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.5
GTEX-U3ZH-1326-SM-4DXSF 1.5
GTEX-ZYFC-2626-SM-5NQ6S 1.3
GTEX-XXEK-1926-SM-4BRVD 1.2
GTEX-Z93S-2426-SM-5HL8N 1.2
GTEX-13FHP-2426-SM-5KLZ5 1.1
GTEX-14ICL-1226-SM-5S2RD 1.1
GTEX-14AS3-1126-SM-5Q5CR 1.1
GTEX-13OW5-2626-SM-5MR3M 1.1
Show all