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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
69.3
nTPM
HPA Brain:
103.2
nTPM
GTEx:
69.3
nTPM
FANTOM5:
61.1
Scaled Tags Per Million
Pig:
95.8
nTPM
Mouse:
141.3
nTPM
Allen mouse:
7.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
103.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 71.7
2019
Male, age 18, unknown
89.1
1827
Male, age 72, unknown
77.0
2666
Male, age 74, left hemisphere
76.7
1870
Female, age 42, unknown
74.1
1833
Male, age 53, unknown
71.4
1830
Male, age 51, unknown
69.6
2219
Male, age 76, both hemispheres
69.1
2411
Female, age 72, unknown
66.2
2586
Male, age 75, left hemisphere
66.1
2828
Female, age 72, unknown
58.1
Dorsal raphe nucleus nTPM: 75.2
1828
Male, age 53, unknown
81.1
2047
Male, age 72, unknown
79.2
2016
Female, age 72, unknown
74.0
2298
Female, age 72, unknown
73.3
2750
Male, age 76, both hemispheres
68.6
Inferior colliculus nTPM: 103.2
2097
Female, age 72, unknown
112.4
2849
Male, age 72, unknown
107.9
1848
Female, age 42, unknown
106.0
1890
Male, age 53, unknown
86.4
Median raphe nucleus nTPM: 71.3
2220
Male, age 76, midline
71.3
Periaquaductal grey, anterior nTPM: 67.2
1947
Male, age 18, unknown
71.2
2502
Female, age 75, unknown
65.9
1795
Male, age 51, unknown
64.4
Periaquaductal grey, dorsal nTPM: 73.7
2850
Male, age 76, both hemispheres
77.1
1840
Male, age 53, unknown
76.7
2464
Female, age 72, unknown
75.4
1831
Male, age 72, unknown
65.5
Periaquaductal grey, lateral nTPM: 62.4
2140
Male, age 76, both hemispheres
68.5
2053
Male, age 18, unknown
61.3
2272
Male, age 74, both hemispheres
57.4
Pretectal area nTPM: 83.9
1817
Female, age 42, unknown
109.3
2007
Male, age 72, unknown
103.5
1944
Female, age 72, unknown
97.5
1816
Male, age 51, unknown
86.2
1815
Male, age 53, unknown
81.6
2667
Female, age 75, unknown
81.6
2316
Male, age 76, right hemisphere
78.2
2224
Female, age 72, unknown
72.9
2273
Male, age 74, both hemispheres
72.3
2825
Male, age 18, unknown
71.3
2407
Male, age 75, both hemispheres
68.6
Red nucleus nTPM: 70.0
1821
Female, age 72, unknown
83.6
2785
Male, age 18, unknown
83.6
1954
Female, age 42, unknown
76.0
2823
Male, age 76, right hemisphere
73.4
2725
Female, age 75, unknown
69.6
2584
Male, age 75, left hemisphere
68.9
2769
Male, age 72, unknown
67.8
2227
Male, age 72, unknown
67.6
2588
Male, age 74, left hemisphere
66.5
2503
Female, age 72, unknown
66.3
1865
Male, age 51, unknown
63.2
1904
Male, age 53, unknown
53.3
Substantia nigra nTPM: 64.3
1941
Male, age 53, unknown
103.9
1889
Female, age 72, unknown
89.4
2665
Male, age 74, both hemispheres
63.8
2241
Male, age 72, unknown
61.7
1916
Female, age 42, unknown
61.4
1851
Male, age 51, unknown
57.2
2699
Male, age 18, unknown
54.6
2583
Male, age 75, right hemisphere
54.1
2590
Female, age 75, unknown
53.7
2409
Female, age 72, unknown
43.0
Superior colliculus nTPM: 73.5
1895
Male, age 76, right hemisphere
91.3
2668
Female, age 75, unknown
86.9
1839
Male, age 51, unknown
84.7
2664
Male, age 75, both hemispheres
80.8
2087
Female, age 72, unknown
79.2
2587
Male, age 74, left hemisphere
71.6
1796
Male, age 53, unknown
66.6
2261
Male, age 18, unknown
61.2
1995
Male, age 72, unknown
57.8
1913
Female, age 42, unknown
54.6
Ventral tegmental area nTPM: 60.5
2218
Male, age 76, both hemispheres
64.7
1942
Male, age 51, unknown
63.6
1915
Female, age 42, unknown
63.1
2410
Female, age 72, unknown
59.5
2223
Female, age 72, unknown
57.3
2021
Male, age 53, unknown
55.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
69.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 69.3
Samples: 139
Max nTPM: 174.0
Min nTPM: 29.6
Std nTPM: 24.6
Median nTPM: 65.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
174.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
152.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
128.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
120.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
117.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
114.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
111.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
111.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
111.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
110.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
109.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
109.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
107.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
107.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
105.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
105.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
102.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
102.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
100.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
100.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
97.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
95.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
93.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
92.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
90.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
88.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
88.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
87.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
85.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
84.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
84.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
81.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
81.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
81.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
80.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
80.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
79.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
78.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
78.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
77.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
76.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
76.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
76.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
75.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
75.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
75.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
73.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
73.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
73.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
72.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
72.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
71.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
71.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
70.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
70.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
70.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
70.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
70.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
69.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
68.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
68.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
67.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
67.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
67.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
67.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
66.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
65.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
65.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
65.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
65.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
64.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
64.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
64.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
64.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
63.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
63.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
63.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
62.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
62.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
62.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
62.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
61.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
60.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
60.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
59.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
58.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
58.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
58.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
58.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
57.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
57.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
57.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
57.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
56.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
55.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
55.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
54.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
53.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
53.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
53.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
53.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
53.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
52.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
52.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
52.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
51.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
50.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
49.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
49.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
49.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
49.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
49.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
48.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
48.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
47.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
47.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
47.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
45.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
45.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
44.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
44.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
44.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
43.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
43.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
43.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
42.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
41.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
40.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
40.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
39.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
38.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
38.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
37.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
33.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
33.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
32.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
32.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
30.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
29.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
141.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 141.3
Samples: 4
Max nTPM: 155.0
Min nTPM: 125.8
Sample A
Male
125.8
Sample B
Male
147.3
Sample C
Female
155.0
Sample D
Female
137.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.