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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
103.6
nTPM
HPA Brain:
90.1
nTPM
GTEx:
103.6
nTPM
FANTOM5:
112.0
Scaled Tags Per Million
Pig:
0.5
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
90.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 68.5
2019
Male, age 18, unknown
110.7
2219
Male, age 76, both hemispheres
80.1
2411
Female, age 72, unknown
73.8
1827
Male, age 72, unknown
69.2
1870
Female, age 42, unknown
64.3
2586
Male, age 75, left hemisphere
63.0
1833
Male, age 53, unknown
58.1
2666
Male, age 74, left hemisphere
56.1
2828
Female, age 72, unknown
56.0
1830
Male, age 51, unknown
53.4
Dorsal raphe nucleus nTPM: 64.3
1828
Male, age 53, unknown
74.9
2298
Female, age 72, unknown
74.1
2750
Male, age 76, both hemispheres
61.7
2016
Female, age 72, unknown
55.3
2047
Male, age 72, unknown
55.3
Inferior colliculus nTPM: 80.2
2097
Female, age 72, unknown
92.0
1890
Male, age 53, unknown
89.8
1848
Female, age 42, unknown
77.8
2849
Male, age 72, unknown
61.2
Median raphe nucleus nTPM: 81.4
2220
Male, age 76, midline
81.4
Periaquaductal grey, anterior nTPM: 68.5
2502
Female, age 75, unknown
72.6
1947
Male, age 18, unknown
69.2
1795
Male, age 51, unknown
63.8
Periaquaductal grey, dorsal nTPM: 61.6
1831
Male, age 72, unknown
64.2
2850
Male, age 76, both hemispheres
62.1
2464
Female, age 72, unknown
61.6
1840
Male, age 53, unknown
58.5
Periaquaductal grey, lateral nTPM: 58.9
2272
Male, age 74, both hemispheres
70.0
2140
Male, age 76, both hemispheres
54.2
2053
Male, age 18, unknown
52.5
Pretectal area nTPM: 90.1
1817
Female, age 42, unknown
128.0
1816
Male, age 51, unknown
125.9
1944
Female, age 72, unknown
124.3
2007
Male, age 72, unknown
118.4
1815
Male, age 53, unknown
95.5
2667
Female, age 75, unknown
92.6
2224
Female, age 72, unknown
74.1
2273
Male, age 74, both hemispheres
73.0
2407
Male, age 75, both hemispheres
58.6
2316
Male, age 76, right hemisphere
50.8
2825
Male, age 18, unknown
49.9
Red nucleus nTPM: 72.0
2785
Male, age 18, unknown
97.5
1821
Female, age 72, unknown
87.9
2725
Female, age 75, unknown
81.7
1865
Male, age 51, unknown
78.9
2503
Female, age 72, unknown
71.5
1904
Male, age 53, unknown
71.1
1954
Female, age 42, unknown
69.2
2227
Male, age 72, unknown
67.2
2769
Male, age 72, unknown
66.8
2823
Male, age 76, right hemisphere
58.3
2584
Male, age 75, left hemisphere
58.1
2588
Male, age 74, left hemisphere
55.4
Substantia nigra nTPM: 81.3
1889
Female, age 72, unknown
109.1
2241
Male, age 72, unknown
106.7
1916
Female, age 42, unknown
94.6
2409
Female, age 72, unknown
88.3
1851
Male, age 51, unknown
81.9
1941
Male, age 53, unknown
78.5
2665
Male, age 74, both hemispheres
75.1
2583
Male, age 75, right hemisphere
63.3
2699
Male, age 18, unknown
60.4
2590
Female, age 75, unknown
55.0
Superior colliculus nTPM: 70.1
2087
Female, age 72, unknown
97.4
2668
Female, age 75, unknown
75.0
2587
Male, age 74, left hemisphere
74.9
2261
Male, age 18, unknown
74.6
1895
Male, age 76, right hemisphere
74.2
1796
Male, age 53, unknown
73.5
1913
Female, age 42, unknown
67.0
1839
Male, age 51, unknown
58.3
1995
Male, age 72, unknown
57.0
2664
Male, age 75, both hemispheres
49.6
Ventral tegmental area nTPM: 68.5
2410
Female, age 72, unknown
82.5
1915
Female, age 42, unknown
78.7
2218
Male, age 76, both hemispheres
69.4
2223
Female, age 72, unknown
64.9
1942
Male, age 51, unknown
63.4
2021
Male, age 53, unknown
52.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
103.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 103.6
Samples: 139
Max nTPM: 311.8
Min nTPM: 48.4
Std nTPM: 35.8
Median nTPM: 95.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
311.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
201.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
191.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
184.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
180.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
180.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
178.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
163.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
161.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
157.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
155.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
150.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
147.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
144.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
144.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
142.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
140.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
139.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
138.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
138.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
136.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
133.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
132.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
131.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
130.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
128.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
127.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
126.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
126.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
123.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
123.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
123.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
123.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
122.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
121.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
120.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
119.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
119.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
119.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
118.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
117.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
116.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
113.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
113.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
113.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
112.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
112.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
111.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
111.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
110.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
110.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
108.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
108.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
107.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
107.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
106.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
106.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
103.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
103.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
102.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
102.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
102.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
100.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
100.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
99.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
98.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
98.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
97.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
97.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
95.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
95.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
95.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
95.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
93.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
92.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
92.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
92.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
91.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
91.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
91.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
91.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
90.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
89.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
89.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
88.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
88.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
87.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
87.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
86.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
86.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
85.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
85.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
84.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
83.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
83.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
83.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
82.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
82.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
82.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
82.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
82.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
81.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
80.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
79.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
79.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
79.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
79.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
78.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
78.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
77.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
77.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
76.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
74.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
74.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
74.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
73.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
72.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
72.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
71.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
70.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
70.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
68.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
68.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
66.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
66.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
65.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
65.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
64.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
63.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
62.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
61.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
59.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
59.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
59.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
58.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
53.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
51.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
51.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
48.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.