ATR

COLON - Expression summary

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RNA expression

HPA:4.0 FPKM
GTEx:2.6 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA028264

 

Endothelial cells

Low  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

4.0

overview Male, age 54
Sample 1
FPKM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 5
Min RPKM: 1.4
Std RPKM: 0.5
Median RPKM: 2.5
GTEX-13O1R-2426-SM-5KLZZ 5.0
GTEX-ZTTD-2626-SM-57WEX 5.0
GTEX-13U4I-2626-SM-5SI9C 3.9
GTEX-13PVQ-2726-SM-5L3H7 3.7
GTEX-Y9LG-1326-SM-4VBQB 3.6
GTEX-14E6C-2226-SM-5QGQG 3.6
GTEX-ZYY3-2226-SM-5E45A 3.4
GTEX-13PL7-2426-SM-5J2N3 3.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 4.4
Min RPKM: 1.1
Std RPKM: 0.5
Median RPKM: 2.6
GTEX-11TUW-2026-SM-5EQL8 4.4
GTEX-13OVJ-1726-SM-5IJDZ 4.3
GTEX-144GM-1226-SM-5LU52 4.2
GTEX-13OW6-2126-SM-5N9GL 4.1
GTEX-R53T-1326-SM-48FCQ 4.0
GTEX-13U4I-2426-SM-5LU34 3.9
GTEX-11TT1-1026-SM-5PNW7 3.9
GTEX-XYKS-2226-SM-4E3IU 3.8
Show all