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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
277.5
nTPM
HPA Brain:
230.2
nTPM
GTEx:
277.5
nTPM
FANTOM5:
138.2
Scaled Tags Per Million
Pig:
172.2
nTPM
Mouse:
484.9
nTPM
Allen mouse:
10.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
230.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 172.6
2019
Male, age 18, unknown
243.5
1827
Male, age 72, unknown
178.3
2586
Male, age 75, left hemisphere
173.0
2219
Male, age 76, both hemispheres
170.0
2828
Female, age 72, unknown
169.7
1833
Male, age 53, unknown
165.8
2411
Female, age 72, unknown
162.4
1870
Female, age 42, unknown
161.8
2666
Male, age 74, left hemisphere
152.5
1830
Male, age 51, unknown
148.9
Dorsal raphe nucleus nTPM: 181.2
1828
Male, age 53, unknown
214.9
2298
Female, age 72, unknown
195.5
2047
Male, age 72, unknown
186.6
2750
Male, age 76, both hemispheres
168.5
2016
Female, age 72, unknown
140.6
Inferior colliculus nTPM: 181.2
1890
Male, age 53, unknown
202.0
2097
Female, age 72, unknown
191.2
1848
Female, age 42, unknown
182.2
2849
Male, age 72, unknown
149.3
Median raphe nucleus nTPM: 167.7
2220
Male, age 76, midline
167.7
Periaquaductal grey, anterior nTPM: 166.3
1947
Male, age 18, unknown
174.7
1795
Male, age 51, unknown
170.3
2502
Female, age 75, unknown
154.0
Periaquaductal grey, dorsal nTPM: 143.9
1831
Male, age 72, unknown
155.5
2850
Male, age 76, both hemispheres
150.4
1840
Male, age 53, unknown
140.2
2464
Female, age 72, unknown
129.6
Periaquaductal grey, lateral nTPM: 156.0
2272
Male, age 74, both hemispheres
191.0
2053
Male, age 18, unknown
140.4
2140
Male, age 76, both hemispheres
136.5
Pretectal area nTPM: 211.8
2007
Male, age 72, unknown
281.3
1817
Female, age 42, unknown
278.0
1944
Female, age 72, unknown
266.1
1816
Male, age 51, unknown
254.5
2667
Female, age 75, unknown
238.0
1815
Male, age 53, unknown
214.1
2273
Male, age 74, both hemispheres
188.8
2224
Female, age 72, unknown
163.0
2407
Male, age 75, both hemispheres
153.9
2825
Male, age 18, unknown
146.9
2316
Male, age 76, right hemisphere
145.8
Red nucleus nTPM: 200.7
1821
Female, age 72, unknown
257.5
2725
Female, age 75, unknown
228.2
2785
Male, age 18, unknown
227.2
1865
Male, age 51, unknown
202.4
2503
Female, age 72, unknown
196.1
2823
Male, age 76, right hemisphere
193.9
2769
Male, age 72, unknown
192.7
1954
Female, age 42, unknown
192.2
2588
Male, age 74, left hemisphere
191.0
2227
Male, age 72, unknown
184.0
1904
Male, age 53, unknown
177.1
2584
Male, age 75, left hemisphere
166.5
Substantia nigra nTPM: 230.2
1916
Female, age 42, unknown
311.2
1889
Female, age 72, unknown
261.7
1941
Male, age 53, unknown
253.8
1851
Male, age 51, unknown
243.6
2241
Male, age 72, unknown
237.7
2409
Female, age 72, unknown
234.4
2665
Male, age 74, both hemispheres
202.2
2699
Male, age 18, unknown
198.0
2590
Female, age 75, unknown
190.2
2583
Male, age 75, right hemisphere
169.3
Superior colliculus nTPM: 172.2
2087
Female, age 72, unknown
234.9
1895
Male, age 76, right hemisphere
200.7
2587
Male, age 74, left hemisphere
187.8
1796
Male, age 53, unknown
177.2
2261
Male, age 18, unknown
175.2
2668
Female, age 75, unknown
164.9
1839
Male, age 51, unknown
156.5
2664
Male, age 75, both hemispheres
145.2
1913
Female, age 42, unknown
143.4
1995
Male, age 72, unknown
136.3
Ventral tegmental area nTPM: 189.7
2410
Female, age 72, unknown
225.9
1915
Female, age 42, unknown
219.0
2218
Male, age 76, both hemispheres
215.4
2223
Female, age 72, unknown
173.9
1942
Male, age 51, unknown
168.2
2021
Male, age 53, unknown
136.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
277.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 277.5
Samples: 139
Max nTPM: 549.2
Min nTPM: 131.5
Std nTPM: 79.4
Median nTPM: 263.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
549.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
491.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
488.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
477.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
473.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
443.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
433.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
430.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
415.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
409.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
406.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
404.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
401.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
398.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
398.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
388.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
387.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
383.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
382.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
371.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
362.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
359.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
354.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
354.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
345.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
340.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
339.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
335.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
332.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
329.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
327.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
326.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
322.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
321.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
318.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
318.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
315.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
313.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
312.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
310.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
305.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
304.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
303.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
299.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
298.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
294.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
292.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
292.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
291.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
287.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
286.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
285.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
285.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
285.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
284.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
284.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
283.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
282.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
282.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
276.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
275.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
275.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
273.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
272.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
270.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
270.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
267.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
266.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
265.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
263.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
262.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
262.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
262.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
260.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
259.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
255.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
253.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
252.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
250.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
249.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
248.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
246.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
245.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
244.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
243.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
241.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
241.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
239.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
238.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
238.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
238.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
237.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
235.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
233.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
229.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
227.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
226.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
225.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
224.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
224.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
223.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
218.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
218.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
216.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
214.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
212.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
210.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
209.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
209.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
208.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
207.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
207.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
206.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
206.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
203.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
203.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
202.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
202.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
201.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
198.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
197.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
196.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
196.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
196.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
195.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
193.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
191.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
191.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
186.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
182.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
182.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
182.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
179.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
167.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
166.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
162.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
159.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
152.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
131.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
484.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 484.9
Samples: 4
Max nTPM: 503.2
Min nTPM: 462.2
Sample A
Male
503.2
Sample B
Male
487.2
Sample C
Female
462.2
Sample D
Female
487.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.