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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
495.5
nTPM
Monaco:
665.1
nTPM
Schmiedel:
552.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
495.5
HPA sample
nTPM
gdT-cell nTPM: 406.1
Samples: 6
Max nTPM: 561.4
Min nTPM: 280.6
P10809_1007
280.6
P10809_1022
561.4
P10809_1041
445.4
P10809_1060
375.2
P10809_1077
378.5
P10809_1098
395.4
MAIT T-cell nTPM: 333.6
Samples: 6
Max nTPM: 444.1
Min nTPM: 262.6
P10809_1006
262.6
P10809_1024
444.1
P10809_1043
348.4
P10809_1062
354.9
P10809_1083
317.4
P10809_1097
274.0
Memory CD4 T-cell nTPM: 335.1
Samples: 6
Max nTPM: 428.0
Min nTPM: 253.9
P10809_1014
253.9
P10809_1026
428.0
P10809_1045
369.5
P10809_1064
337.5
P10809_1086
310.6
P10809_1113
311.0
Memory CD8 T-cell nTPM: 376.7
Samples: 5
Max nTPM: 445.4
Min nTPM: 292.9
P10809_1012
292.9
P10809_1027
416.1
P10809_1046
397.6
P10809_1065
445.4
P10809_1111
331.5
Naive CD4 T-cell nTPM: 280.0
Samples: 6
Max nTPM: 318.3
Min nTPM: 193.5
P10809_1015
193.5
P10809_1030
318.3
P10809_1049
290.0
P10809_1068
309.7
P10809_1085
313.6
P10809_1112
254.9
Naive CD8 T-cell nTPM: 327.1
Samples: 6
Max nTPM: 391.4
Min nTPM: 219.5
P10809_1016
219.5
P10809_1031
381.8
P10809_1050
335.3
P10809_1069
391.4
P10809_1087
368.7
P10809_1110
266.0
T-reg nTPM: 495.5
Samples: 6
Max nTPM: 573.3
Min nTPM: 388.0
P10809_1018
388.0
P10809_1037
545.1
P10809_1056
566.3
P10809_1075
460.2
P10809_1094
573.3
P10809_1106
440.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
665.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 465.9
Samples: 4
Max nTPM: 534.4
Min nTPM: 384.9
RHH5202_R3573
473.9
RHH5230_R3602
534.4
RHH5259_R3631
384.9
RHH5288_R3660
470.5
Effector memory CD8 T-cell nTPM: 665.1
Samples: 4
Max nTPM: 708.4
Min nTPM: 592.2
RHH5203_R3574
705.9
RHH5231_R3603
592.2
RHH5260_R3632
653.9
RHH5289_R3661
708.4
MAIT T-cell nTPM: 518.8
Samples: 4
Max nTPM: 623.9
Min nTPM: 426.5
RHH5233_R3605
479.2
RHH5205_R3576
623.9
RHH5262_R3634
545.5
RHH5297_R3663
426.5
Memory CD4 T-cell TFH nTPM: 507.5
Samples: 4
Max nTPM: 593.9
Min nTPM: 440.2
RHH5300_R3666
440.2
RHH5236_R3608
593.9
RHH5265_R3637
518.6
RHH5208_R3579
477.2
Memory CD4 T-cell Th1 nTPM: 443.5
Samples: 4
Max nTPM: 493.2
Min nTPM: 371.5
RHH5210_R3581
455.4
RHH5302_R3668
453.8
RHH5238_R3610
371.5
RHH5267_R3639
493.2
Memory CD4 T-cell Th1/Th17 nTPM: 507.1
Samples: 4
Max nTPM: 623.5
Min nTPM: 401.3
RHH5303_R3669
561.6
RHH5211_R3582
623.5
RHH5239_R3611
401.3
RHH5268_R3640
442.1
Memory CD4 T-cell Th17 nTPM: 518.6
Samples: 4
Max nTPM: 620.2
Min nTPM: 456.0
RHH5304_R3670
500.8
RHH5212_R3583
497.3
RHH5240_R3612
620.2
RHH5269_R3641
456.0
Memory CD4 T-cell Th2 nTPM: 514.8
Samples: 4
Max nTPM: 555.5
Min nTPM: 478.7
RHH5305_R3671
478.7
RHH5213_R3584
536.8
RHH5241_R3613
488.1
RHH5270_R3642
555.5
Naive CD4 T-cell nTPM: 375.8
Samples: 4
Max nTPM: 411.5
Min nTPM: 361.4
RHH5306_R3672
361.4
RHH5214_R3585
411.5
RHH5242_R3614
364.2
RHH5271_R3643
366.0
Naive CD8 T-cell nTPM: 422.0
Samples: 4
Max nTPM: 467.5
Min nTPM: 303.7
RHH5201_R3572
467.5
RHH5229_R3601
303.7
RHH5258_R3630
466.2
RHH5287_R3659
450.5
Non-Vd2 gdTCR nTPM: 661.7
Samples: 4
Max nTPM: 716.6
Min nTPM: 563.4
RHH5235_R3607
651.3
RHH5264_R3636
716.6
RHH5207_R3578
715.6
RHH5299_R3665
563.4
T-reg nTPM: 520.8
Samples: 4
Max nTPM: 633.0
Min nTPM: 432.4
RHH5301_R3667
432.4
RHH5237_R3609
633.0
RHH5266_R3638
496.0
RHH5209_R3580
521.6
Terminal effector memory CD4 T-cell nTPM: 519.9
Samples: 2
Max nTPM: 542.5
Min nTPM: 497.2
RHH5243_R3615
497.2
RHH5272_R3644
542.5
Terminal effector memory CD8 T-cell nTPM: 630.1
Samples: 4
Max nTPM: 701.1
Min nTPM: 577.9
RHH5232_R3604
640.0
RHH5204_R3575
601.4
RHH5261_R3633
701.1
RHH5296_R3662
577.9
Vd2 gdTCR nTPM: 550.5
Samples: 4
Max nTPM: 632.5
Min nTPM: 422.2
RHH5234_R3606
549.0
RHH5206_R3577
632.5
RHH5263_R3635
598.4
RHH5298_R3664
422.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.