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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
14.6
nTPM
HPA Brain:
106.4
nTPM
GTEx:
14.6
nTPM
FANTOM5:
196.0
Scaled Tags Per Million
Pig:
61.6
nTPM
Mouse:
40.2
nTPM
Allen mouse:
1.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
106.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 88.6
2411
Female, age 72, unknown
132.9
1870
Female, age 42, unknown
117.5
1830
Male, age 51, unknown
113.4
1833
Male, age 53, unknown
95.1
2019
Male, age 18, unknown
94.4
2666
Male, age 74, left hemisphere
75.3
2828
Female, age 72, unknown
70.7
2219
Male, age 76, both hemispheres
67.2
1827
Male, age 72, unknown
64.3
2586
Male, age 75, left hemisphere
55.0
Dorsal raphe nucleus nTPM: 78.6
2750
Male, age 76, both hemispheres
142.3
2016
Female, age 72, unknown
72.1
2047
Male, age 72, unknown
66.8
1828
Male, age 53, unknown
63.9
2298
Female, age 72, unknown
47.6
Inferior colliculus nTPM: 60.7
1848
Female, age 42, unknown
64.7
1890
Male, age 53, unknown
64.4
2849
Male, age 72, unknown
57.9
2097
Female, age 72, unknown
55.8
Median raphe nucleus nTPM: 87.0
2220
Male, age 76, midline
87.0
Periaquaductal grey, anterior nTPM: 61.0
1947
Male, age 18, unknown
71.5
2502
Female, age 75, unknown
67.2
1795
Male, age 51, unknown
44.2
Periaquaductal grey, dorsal nTPM: 53.5
2464
Female, age 72, unknown
70.8
1831
Male, age 72, unknown
51.7
1840
Male, age 53, unknown
51.0
2850
Male, age 76, both hemispheres
40.4
Periaquaductal grey, lateral nTPM: 48.9
2053
Male, age 18, unknown
56.9
2272
Male, age 74, both hemispheres
50.8
2140
Male, age 76, both hemispheres
38.8
Pretectal area nTPM: 55.0
2316
Male, age 76, right hemisphere
70.3
1815
Male, age 53, unknown
69.3
2825
Male, age 18, unknown
66.6
2007
Male, age 72, unknown
66.1
1817
Female, age 42, unknown
58.7
2273
Male, age 74, both hemispheres
54.3
2224
Female, age 72, unknown
53.9
2407
Male, age 75, both hemispheres
45.4
1944
Female, age 72, unknown
43.1
2667
Female, age 75, unknown
41.6
1816
Male, age 51, unknown
35.8
Red nucleus nTPM: 106.4
1821
Female, age 72, unknown
133.8
1865
Male, age 51, unknown
126.2
2503
Female, age 72, unknown
122.3
2823
Male, age 76, right hemisphere
117.7
2227
Male, age 72, unknown
110.8
2769
Male, age 72, unknown
108.9
1954
Female, age 42, unknown
108.4
1904
Male, age 53, unknown
103.6
2588
Male, age 74, left hemisphere
102.3
2785
Male, age 18, unknown
89.2
2725
Female, age 75, unknown
81.8
2584
Male, age 75, left hemisphere
72.0
Substantia nigra nTPM: 71.2
1851
Male, age 51, unknown
84.6
2409
Female, age 72, unknown
80.8
1889
Female, age 72, unknown
77.9
2590
Female, age 75, unknown
77.1
2583
Male, age 75, right hemisphere
73.9
2241
Male, age 72, unknown
73.3
1916
Female, age 42, unknown
64.1
1941
Male, age 53, unknown
63.6
2699
Male, age 18, unknown
63.0
2665
Male, age 74, both hemispheres
53.4
Superior colliculus nTPM: 67.2
1913
Female, age 42, unknown
95.3
2587
Male, age 74, left hemisphere
87.7
2668
Female, age 75, unknown
86.4
1839
Male, age 51, unknown
79.3
1895
Male, age 76, right hemisphere
70.5
1995
Male, age 72, unknown
70.5
1796
Male, age 53, unknown
52.1
2087
Female, age 72, unknown
49.3
2261
Male, age 18, unknown
43.6
2664
Male, age 75, both hemispheres
37.0
Ventral tegmental area nTPM: 85.0
2223
Female, age 72, unknown
108.3
2410
Female, age 72, unknown
97.2
2021
Male, age 53, unknown
89.1
2218
Male, age 76, both hemispheres
75.5
1942
Male, age 51, unknown
71.2
1915
Female, age 42, unknown
68.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
14.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 14.6
Samples: 139
Max nTPM: 69.9
Min nTPM: 1.3
Std nTPM: 9.8
Median nTPM: 12.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
69.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
48.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
46.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
45.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
37.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
35.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
34.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
31.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
29.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
29.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
28.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
28.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
26.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
26.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
24.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
24.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
23.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
23.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
23.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
23.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
23.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
22.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
22.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
21.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
21.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
21.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
20.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
20.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
20.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
20.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
19.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
18.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
17.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
17.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
17.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
17.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
17.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
17.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
17.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
16.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
16.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
16.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
16.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
15.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
15.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
15.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
15.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
15.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
14.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
14.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
14.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
14.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
14.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
14.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
14.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
14.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
13.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
13.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
13.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
13.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
13.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
13.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
13.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
13.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
13.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
13.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
12.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
12.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
12.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
12.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
11.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
11.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
11.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
11.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
11.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
11.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
11.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
11.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
11.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
11.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
10.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
10.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
10.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
10.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
10.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
10.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
10.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
10.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
10.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
9.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
9.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
9.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
9.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
9.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
9.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
9.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
9.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
9.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
9.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
9.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
9.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
9.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
8.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
8.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
8.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
8.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
8.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
7.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
7.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
7.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
7.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
7.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
6.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
6.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
6.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
6.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
6.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
6.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
6.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
6.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
6.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
6.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
6.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
6.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
6.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
5.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
5.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
5.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
5.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
5.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
5.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
4.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
4.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
4.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
4.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
2.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
40.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 40.2
Samples: 4
Max nTPM: 43.1
Min nTPM: 38.1
Sample A
Male
38.1
Sample B
Male
43.1
Sample C
Female
40.4
Sample D
Female
39.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.