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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
183.6
nTPM
HPA Brain:
110.5
nTPM
GTEx:
183.6
nTPM
FANTOM5:
343.3
Scaled Tags Per Million
Pig:
204.9
nTPM
Mouse:
126.5
nTPM
Allen mouse:
7.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
110.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 87.5
2411
Female, age 72, unknown
130.4
1870
Female, age 42, unknown
116.7
2019
Male, age 18, unknown
105.7
2219
Male, age 76, both hemispheres
96.3
1833
Male, age 53, unknown
91.5
1830
Male, age 51, unknown
84.2
1827
Male, age 72, unknown
76.5
2828
Female, age 72, unknown
70.7
2666
Male, age 74, left hemisphere
62.4
2586
Male, age 75, left hemisphere
40.3
Dorsal raphe nucleus nTPM: 103.5
2750
Male, age 76, both hemispheres
121.2
2298
Female, age 72, unknown
114.9
1828
Male, age 53, unknown
101.8
2047
Male, age 72, unknown
98.9
2016
Female, age 72, unknown
80.9
Inferior colliculus nTPM: 87.4
2097
Female, age 72, unknown
99.7
1848
Female, age 42, unknown
91.1
1890
Male, age 53, unknown
86.5
2849
Male, age 72, unknown
72.3
Median raphe nucleus nTPM: 106.9
2220
Male, age 76, midline
106.9
Periaquaductal grey, anterior nTPM: 85.3
1947
Male, age 18, unknown
97.5
2502
Female, age 75, unknown
89.7
1795
Male, age 51, unknown
68.7
Periaquaductal grey, dorsal nTPM: 72.0
2464
Female, age 72, unknown
78.6
1840
Male, age 53, unknown
75.6
2850
Male, age 76, both hemispheres
74.2
1831
Male, age 72, unknown
59.5
Periaquaductal grey, lateral nTPM: 69.3
2272
Male, age 74, both hemispheres
84.4
2053
Male, age 18, unknown
64.1
2140
Male, age 76, both hemispheres
59.4
Pretectal area nTPM: 88.7
2667
Female, age 75, unknown
135.9
1817
Female, age 42, unknown
103.6
2007
Male, age 72, unknown
100.8
2224
Female, age 72, unknown
97.0
2273
Male, age 74, both hemispheres
89.6
1944
Female, age 72, unknown
84.6
2316
Male, age 76, right hemisphere
83.2
1816
Male, age 51, unknown
80.7
1815
Male, age 53, unknown
78.6
2825
Male, age 18, unknown
68.7
2407
Male, age 75, both hemispheres
52.8
Red nucleus nTPM: 101.0
1821
Female, age 72, unknown
161.9
1954
Female, age 42, unknown
129.3
1865
Male, age 51, unknown
113.6
1904
Male, age 53, unknown
108.5
2227
Male, age 72, unknown
104.5
2769
Male, age 72, unknown
102.7
2785
Male, age 18, unknown
102.5
2823
Male, age 76, right hemisphere
99.7
2503
Female, age 72, unknown
96.1
2725
Female, age 75, unknown
73.5
2588
Male, age 74, left hemisphere
72.2
2584
Male, age 75, left hemisphere
47.8
Substantia nigra nTPM: 107.4
2241
Male, age 72, unknown
158.2
1916
Female, age 42, unknown
154.5
1851
Male, age 51, unknown
123.6
2409
Female, age 72, unknown
119.5
1941
Male, age 53, unknown
115.2
1889
Female, age 72, unknown
111.8
2699
Male, age 18, unknown
94.0
2590
Female, age 75, unknown
74.9
2665
Male, age 74, both hemispheres
64.5
2583
Male, age 75, right hemisphere
57.4
Superior colliculus nTPM: 74.6
2587
Male, age 74, left hemisphere
102.0
1895
Male, age 76, right hemisphere
96.2
1839
Male, age 51, unknown
79.8
2668
Female, age 75, unknown
77.9
1913
Female, age 42, unknown
77.8
2087
Female, age 72, unknown
73.2
1796
Male, age 53, unknown
73.1
2261
Male, age 18, unknown
68.4
1995
Male, age 72, unknown
57.2
2664
Male, age 75, both hemispheres
40.4
Ventral tegmental area nTPM: 110.5
2410
Female, age 72, unknown
136.2
1915
Female, age 42, unknown
124.6
2218
Male, age 76, both hemispheres
123.6
2223
Female, age 72, unknown
106.1
1942
Male, age 51, unknown
90.6
2021
Male, age 53, unknown
82.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
183.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 183.6
Samples: 139
Max nTPM: 449.5
Min nTPM: 97.2
Std nTPM: 54.0
Median nTPM: 174.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
449.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
407.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
336.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
304.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
297.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
287.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
287.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
277.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
268.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
260.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
248.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
246.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
246.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
245.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
244.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
241.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
239.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
235.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
235.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
234.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
231.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
229.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
227.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
227.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
224.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
224.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
223.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
221.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
218.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
218.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
217.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
213.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
212.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
211.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
206.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
205.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
204.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
203.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
202.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
200.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
200.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
199.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
199.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
198.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
195.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
195.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
193.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
190.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
188.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
188.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
188.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
188.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
188.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
186.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
186.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
185.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
185.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
185.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
184.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
183.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
182.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
181.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
180.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
179.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
179.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
178.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
178.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
176.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
174.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
174.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
174.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
174.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
172.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
171.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
170.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
169.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
169.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
168.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
168.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
167.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
165.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
163.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
162.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
162.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
161.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
161.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
161.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
159.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
158.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
157.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
157.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
157.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
157.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
156.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
155.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
155.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
155.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
154.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
154.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
153.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
153.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
153.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
152.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
151.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
151.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
150.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
149.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
149.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
149.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
148.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
147.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
145.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
145.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
143.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
142.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
140.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
140.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
140.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
138.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
138.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
135.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
130.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
129.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
128.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
128.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
125.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
124.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
123.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
120.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
114.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
112.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
109.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
106.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
105.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
105.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
104.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
102.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
97.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
97.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
126.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 126.5
Samples: 4
Max nTPM: 130.1
Min nTPM: 123.2
Sample A
Male
125.3
Sample B
Male
127.4
Sample C
Female
123.2
Sample D
Female
130.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.