ADO

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.4 FPKM
GTEx:5.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA039194

 

Antibody HPA040437

 

Endothelial cells

Low   Medium  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   

COLON - HPA RNA-seq

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Average FPKM

6.4

overview Male, age 54
Sample 1
FPKM: 6.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.6
Samples: 149

Max RPKM: 8.9
Min RPKM: 2.4
Std RPKM: 1.2
Median RPKM: 5.6
GTEX-11I78-1326-SM-5PNY9 8.9
GTEX-XV7Q-2226-SM-4BRVY 8.4
GTEX-ZTSS-1226-SM-51MSZ 8.3
GTEX-14BMU-1326-SM-5RQIH 7.6
GTEX-132AR-2826-SM-5IJFV 7.6
GTEX-ZPIC-2626-SM-57WE2 7.5
GTEX-11TT1-0926-SM-5GU5M 7.5
GTEX-XXEK-1826-SM-4BRVC 7.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 8
Min RPKM: 2.5
Std RPKM: 1.1
Median RPKM: 4.8
GTEX-XXEK-1926-SM-4BRVD 8.0
GTEX-R53T-1326-SM-48FCQ 7.9
GTEX-13S86-1626-SM-5Q5C5 7.9
GTEX-WQUQ-2526-SM-4MVNO 7.5
GTEX-11NSD-1626-SM-5986U 7.3
GTEX-U3ZH-1326-SM-4DXSF 7.1
GTEX-X5EB-0926-SM-46MVT 7.0
GTEX-V955-1626-SM-4JBHJ 7.0
Show all