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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.9
nTPM
HPA Brain:
69.2
nTPM
GTEx:
40.9
nTPM
FANTOM5:
61.0
Scaled Tags Per Million
Mouse:
93.3
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
69.2
Sample id
Sample description
nTPM
Amygdala nTPM: 54.7
1987
Female, age 91, left hemisphere
76.1
2517
Female, age 94, left hemisphere
58.9
2814
Male, age 76, right hemisphere
57.2
2514
Male, age 75, right hemisphere
45.5
2695
Female, age 67, right hemisphere
35.8
Basal amygdala nTPM: 60.6
2243
Female, age 91, right hemisphere
80.1
2110
Male, age 80, left hemisphere
73.0
2685
Female, age 94, left hemisphere
69.2
1955
Male, age 76, both hemispheres
59.5
2609
Male, age 75, right hemisphere
41.2
2827
Female, age 67, right hemisphere
40.6
Central amygdala nTPM: 59.3
2239
Male, age 80, left hemisphere
78.8
2701
Female, age 91, right hemisphere
69.0
1905
Male, age 76, both hemispheres
57.4
2826
Female, age 94, left hemisphere
46.6
2515
Male, age 75, right hemisphere
45.0
Corticomedial amygdala nTPM: 69.2
2829
Male, age 80, left hemisphere
88.5
2242
Female, age 91, right hemisphere
87.3
2429
Female, age 94, left hemisphere
74.9
2240
Male, age 76, both hemispheres
65.3
2535
Female, age 67, right hemisphere
59.0
2428
Male, age 75, right hemisphere
40.1
Lateral amygdala nTPM: 52.3
2255
Female, age 91, right hemisphere
68.8
2534
Female, age 94, left hemisphere
63.6
1883
Male, age 76, both hemispheres
61.1
2256
Male, age 80, left hemisphere
55.0
2516
Male, age 75, right hemisphere
36.2
2830
Female, age 67, right hemisphere
29.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
40.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.9
Samples: 152
Max nTPM: 91.5
Min nTPM: 1.4
Std nTPM: 18.6
Median nTPM: 37.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
91.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
89.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
86.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
83.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
82.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
81.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
80.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
74.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
74.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
73.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
72.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
71.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
70.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
66.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
65.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
65.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
64.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
64.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
62.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
62.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
61.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
60.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
59.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
59.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
59.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
57.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
55.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
55.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
54.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
54.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
54.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
54.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
53.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
53.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
53.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
53.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
52.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
52.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
50.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
48.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
48.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
47.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
47.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
47.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
46.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
46.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
45.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
44.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
44.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
44.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
44.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
42.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
41.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
40.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
40.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
40.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
39.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
38.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
38.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
37.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
36.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
36.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
36.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
36.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
36.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
35.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
34.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
33.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
33.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
33.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
33.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
33.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
32.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
32.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
32.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
31.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
31.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
31.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
31.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
30.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
29.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
29.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
29.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
29.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
28.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
28.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
28.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
27.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
27.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
25.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
25.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
25.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
24.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
24.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
23.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
23.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
23.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
22.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
22.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
22.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
22.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
22.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
21.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
20.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
20.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
20.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
20.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
19.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
18.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
18.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
18.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
17.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
16.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
14.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
14.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
14.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
13.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.