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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
23.7
nTPM
HPA Brain:
233.5
nTPM
GTEx:
23.7
nTPM
FANTOM5:
79.9
Scaled Tags Per Million
Pig:
209.6
nTPM
Mouse:
65.7
nTPM
Allen mouse:
0.3
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
233.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 208.4
2019
Male, age 18, unknown
258.1
1830
Male, age 51, unknown
244.7
2411
Female, age 72, unknown
239.0
1827
Male, age 72, unknown
218.9
2828
Female, age 72, unknown
208.4
1833
Male, age 53, unknown
208.1
1870
Female, age 42, unknown
206.0
2586
Male, age 75, left hemisphere
181.0
2666
Male, age 74, left hemisphere
172.4
2219
Male, age 76, both hemispheres
147.7
Dorsal raphe nucleus nTPM: 167.5
2750
Male, age 76, both hemispheres
201.7
1828
Male, age 53, unknown
195.8
2016
Female, age 72, unknown
181.6
2047
Male, age 72, unknown
141.8
2298
Female, age 72, unknown
116.8
Inferior colliculus nTPM: 162.8
2097
Female, age 72, unknown
169.7
1848
Female, age 42, unknown
165.9
2849
Male, age 72, unknown
158.0
1890
Male, age 53, unknown
157.8
Median raphe nucleus nTPM: 117.5
2220
Male, age 76, midline
117.5
Periaquaductal grey, anterior nTPM: 189.9
1947
Male, age 18, unknown
242.0
2502
Female, age 75, unknown
187.9
1795
Male, age 51, unknown
139.8
Periaquaductal grey, dorsal nTPM: 140.5
2464
Female, age 72, unknown
191.4
1831
Male, age 72, unknown
131.8
2850
Male, age 76, both hemispheres
120.9
1840
Male, age 53, unknown
117.8
Periaquaductal grey, lateral nTPM: 134.3
2272
Male, age 74, both hemispheres
148.1
2053
Male, age 18, unknown
131.5
2140
Male, age 76, both hemispheres
123.5
Pretectal area nTPM: 184.0
1817
Female, age 42, unknown
236.9
2007
Male, age 72, unknown
233.4
1815
Male, age 53, unknown
213.7
2316
Male, age 76, right hemisphere
196.2
2667
Female, age 75, unknown
179.7
1816
Male, age 51, unknown
177.0
2407
Male, age 75, both hemispheres
176.5
1944
Female, age 72, unknown
161.0
2224
Female, age 72, unknown
155.1
2273
Male, age 74, both hemispheres
147.6
2825
Male, age 18, unknown
147.3
Red nucleus nTPM: 233.5
1865
Male, age 51, unknown
274.6
2785
Male, age 18, unknown
264.9
2503
Female, age 72, unknown
262.3
2823
Male, age 76, right hemisphere
247.1
1821
Female, age 72, unknown
246.9
2588
Male, age 74, left hemisphere
241.4
1904
Male, age 53, unknown
225.5
1954
Female, age 42, unknown
223.5
2769
Male, age 72, unknown
220.1
2227
Male, age 72, unknown
216.9
2725
Female, age 75, unknown
213.4
2584
Male, age 75, left hemisphere
165.5
Substantia nigra nTPM: 169.6
2409
Female, age 72, unknown
219.1
2583
Male, age 75, right hemisphere
203.2
1889
Female, age 72, unknown
202.9
1941
Male, age 53, unknown
183.3
2590
Female, age 75, unknown
177.7
1851
Male, age 51, unknown
169.1
2665
Male, age 74, both hemispheres
147.4
2699
Male, age 18, unknown
138.0
2241
Male, age 72, unknown
134.9
1916
Female, age 42, unknown
120.5
Superior colliculus nTPM: 186.4
1995
Male, age 72, unknown
232.4
1913
Female, age 42, unknown
230.8
1895
Male, age 76, right hemisphere
208.6
1839
Male, age 51, unknown
195.6
2587
Male, age 74, left hemisphere
191.9
2668
Female, age 75, unknown
186.4
1796
Male, age 53, unknown
171.9
2087
Female, age 72, unknown
157.2
2261
Male, age 18, unknown
148.6
2664
Male, age 75, both hemispheres
140.3
Ventral tegmental area nTPM: 167.8
2410
Female, age 72, unknown
235.3
2223
Female, age 72, unknown
188.3
2218
Male, age 76, both hemispheres
149.9
1942
Male, age 51, unknown
147.0
1915
Female, age 42, unknown
146.5
2021
Male, age 53, unknown
139.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 23.7
Samples: 139
Max nTPM: 47.7
Min nTPM: 12.0
Std nTPM: 7.3
Median nTPM: 21.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
47.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
43.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
42.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
42.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
41.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
39.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
38.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
37.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
37.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
36.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
36.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
36.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
35.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
34.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
34.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
34.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
33.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
33.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
33.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
32.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
32.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
31.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
31.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
31.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
31.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
31.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
30.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
29.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
29.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
29.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
28.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
28.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
28.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
27.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
27.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
27.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
26.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
26.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
26.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
26.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
26.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
26.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
25.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
25.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
25.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
25.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
25.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
25.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
24.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
24.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
24.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
23.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
23.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
23.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
23.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
23.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
23.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
23.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
23.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
23.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
23.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
23.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
22.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
22.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
22.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
22.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
22.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
22.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
22.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
21.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
21.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
21.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
21.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
21.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
21.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
21.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
21.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
21.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
20.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
20.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
20.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
20.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
20.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
20.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
20.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
20.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
20.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
20.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
20.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
19.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
19.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
19.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
19.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
19.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
19.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
19.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
19.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
19.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
18.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
18.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
18.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
18.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
18.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
18.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
18.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
18.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
18.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
18.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
18.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
18.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
18.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
18.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
18.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
17.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
17.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
17.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
17.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
17.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
17.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
16.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
16.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
16.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
16.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
15.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
15.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
15.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
15.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
15.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
14.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
14.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
14.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
14.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
14.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
14.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
13.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
13.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
13.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
12.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
12.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
65.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 65.7
Samples: 4
Max nTPM: 74.2
Min nTPM: 53.4
Sample A
Male
53.4
Sample B
Male
65.5
Sample C
Female
74.2
Sample D
Female
69.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.