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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
211.7
nTPM
Monaco:
255.8
nTPM
Schmiedel:
383.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.7
HPA sample
nTPM
gdT-cell nTPM: 211.7
Samples: 6
Max nTPM: 237.8
Min nTPM: 151.9
P10809_1007
214.3
P10809_1022
151.9
P10809_1041
226.5
P10809_1060
212.9
P10809_1077
237.8
P10809_1098
226.9
MAIT T-cell nTPM: 197.7
Samples: 6
Max nTPM: 254.2
Min nTPM: 129.9
P10809_1006
177.1
P10809_1024
129.9
P10809_1043
254.2
P10809_1062
245.7
P10809_1083
184.7
P10809_1097
194.8
Memory CD4 T-cell nTPM: 169.3
Samples: 6
Max nTPM: 203.6
Min nTPM: 138.3
P10809_1014
148.5
P10809_1026
183.4
P10809_1045
158.2
P10809_1064
183.8
P10809_1086
138.3
P10809_1113
203.6
Memory CD8 T-cell nTPM: 150.4
Samples: 5
Max nTPM: 183.6
Min nTPM: 121.5
P10809_1012
121.5
P10809_1027
146.7
P10809_1046
183.6
P10809_1065
158.9
P10809_1111
141.1
Naive CD4 T-cell nTPM: 179.7
Samples: 6
Max nTPM: 223.4
Min nTPM: 130.0
P10809_1015
158.6
P10809_1030
130.0
P10809_1049
178.8
P10809_1068
223.4
P10809_1085
172.2
P10809_1112
215.2
Naive CD8 T-cell nTPM: 162.8
Samples: 6
Max nTPM: 200.5
Min nTPM: 122.2
P10809_1016
178.0
P10809_1031
122.2
P10809_1050
158.2
P10809_1069
200.5
P10809_1087
138.5
P10809_1110
179.2
T-reg nTPM: 175.1
Samples: 6
Max nTPM: 238.1
Min nTPM: 98.4
P10809_1018
148.3
P10809_1037
98.4
P10809_1056
176.0
P10809_1075
238.1
P10809_1094
226.3
P10809_1106
163.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
255.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 159.0
Samples: 4
Max nTPM: 207.4
Min nTPM: 132.0
RHH5202_R3573
132.0
RHH5230_R3602
139.1
RHH5259_R3631
157.3
RHH5288_R3660
207.4
Effector memory CD8 T-cell nTPM: 156.5
Samples: 4
Max nTPM: 194.2
Min nTPM: 111.6
RHH5203_R3574
111.6
RHH5231_R3603
142.0
RHH5260_R3632
194.2
RHH5289_R3661
178.1
MAIT T-cell nTPM: 255.8
Samples: 4
Max nTPM: 290.5
Min nTPM: 224.0
RHH5233_R3605
257.2
RHH5205_R3576
224.0
RHH5262_R3634
251.6
RHH5297_R3663
290.5
Memory CD4 T-cell TFH nTPM: 187.1
Samples: 4
Max nTPM: 211.2
Min nTPM: 153.8
RHH5300_R3666
179.2
RHH5236_R3608
211.2
RHH5265_R3637
204.2
RHH5208_R3579
153.8
Memory CD4 T-cell Th1 nTPM: 170.2
Samples: 4
Max nTPM: 193.7
Min nTPM: 141.7
RHH5210_R3581
141.7
RHH5302_R3668
193.7
RHH5238_R3610
160.6
RHH5267_R3639
184.8
Memory CD4 T-cell Th1/Th17 nTPM: 201.9
Samples: 4
Max nTPM: 259.1
Min nTPM: 155.4
RHH5303_R3669
259.1
RHH5211_R3582
167.3
RHH5239_R3611
155.4
RHH5268_R3640
225.6
Memory CD4 T-cell Th17 nTPM: 238.0
Samples: 4
Max nTPM: 257.8
Min nTPM: 209.0
RHH5304_R3670
257.8
RHH5212_R3583
233.9
RHH5240_R3612
209.0
RHH5269_R3641
251.3
Memory CD4 T-cell Th2 nTPM: 142.1
Samples: 4
Max nTPM: 169.2
Min nTPM: 99.4
RHH5305_R3671
169.2
RHH5213_R3584
99.4
RHH5241_R3613
142.1
RHH5270_R3642
157.6
Naive CD4 T-cell nTPM: 145.4
Samples: 4
Max nTPM: 182.2
Min nTPM: 118.4
RHH5306_R3672
182.2
RHH5214_R3585
127.9
RHH5242_R3614
118.4
RHH5271_R3643
153.1
Naive CD8 T-cell nTPM: 138.4
Samples: 4
Max nTPM: 208.4
Min nTPM: 95.2
RHH5201_R3572
95.2
RHH5229_R3601
118.3
RHH5258_R3630
208.4
RHH5287_R3659
131.8
Non-Vd2 gdTCR nTPM: 179.9
Samples: 4
Max nTPM: 215.1
Min nTPM: 148.9
RHH5235_R3607
148.9
RHH5264_R3636
192.9
RHH5207_R3578
162.7
RHH5299_R3665
215.1
T-reg nTPM: 198.0
Samples: 4
Max nTPM: 221.0
Min nTPM: 147.3
RHH5301_R3667
217.2
RHH5237_R3609
206.5
RHH5266_R3638
221.0
RHH5209_R3580
147.3
Terminal effector memory CD4 T-cell nTPM: 207.8
Samples: 2
Max nTPM: 241.5
Min nTPM: 174.1
RHH5243_R3615
174.1
RHH5272_R3644
241.5
Terminal effector memory CD8 T-cell nTPM: 219.3
Samples: 4
Max nTPM: 291.8
Min nTPM: 171.9
RHH5232_R3604
171.9
RHH5204_R3575
291.8
RHH5261_R3633
212.4
RHH5296_R3662
201.1
Vd2 gdTCR nTPM: 190.5
Samples: 4
Max nTPM: 221.1
Min nTPM: 149.7
RHH5234_R3606
149.7
RHH5206_R3577
206.0
RHH5263_R3635
185.2
RHH5298_R3664
221.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.