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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
32.3
nTPM
HPA Brain:
59.7
nTPM
GTEx:
32.3
nTPM
FANTOM5:
127.3
Scaled Tags Per Million
Pig:
24.2
nTPM
Mouse:
6.2
nTPM
Allen mouse:
4.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
59.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 56.5
2828
Female, age 72, unknown
64.3
2586
Male, age 75, left hemisphere
63.2
2666
Male, age 74, left hemisphere
61.8
2411
Female, age 72, unknown
58.0
1830
Male, age 51, unknown
57.4
1833
Male, age 53, unknown
56.4
1827
Male, age 72, unknown
54.6
1870
Female, age 42, unknown
54.4
2219
Male, age 76, both hemispheres
49.1
2019
Male, age 18, unknown
46.5
Dorsal raphe nucleus nTPM: 54.2
2016
Female, age 72, unknown
56.7
2750
Male, age 76, both hemispheres
54.9
2298
Female, age 72, unknown
54.3
1828
Male, age 53, unknown
53.5
2047
Male, age 72, unknown
51.9
Inferior colliculus nTPM: 45.5
2849
Male, age 72, unknown
48.6
1890
Male, age 53, unknown
46.8
1848
Female, age 42, unknown
44.3
2097
Female, age 72, unknown
42.1
Median raphe nucleus nTPM: 49.8
2220
Male, age 76, midline
49.8
Periaquaductal grey, anterior nTPM: 54.4
1795
Male, age 51, unknown
60.4
1947
Male, age 18, unknown
54.0
2502
Female, age 75, unknown
48.7
Periaquaductal grey, dorsal nTPM: 52.1
2464
Female, age 72, unknown
57.9
1831
Male, age 72, unknown
53.2
2850
Male, age 76, both hemispheres
48.9
1840
Male, age 53, unknown
48.4
Periaquaductal grey, lateral nTPM: 59.7
2272
Male, age 74, both hemispheres
61.3
2140
Male, age 76, both hemispheres
60.8
2053
Male, age 18, unknown
57.0
Pretectal area nTPM: 52.8
2407
Male, age 75, both hemispheres
63.5
2316
Male, age 76, right hemisphere
63.0
2825
Male, age 18, unknown
59.5
1815
Male, age 53, unknown
53.8
2273
Male, age 74, both hemispheres
53.0
2224
Female, age 72, unknown
51.7
2007
Male, age 72, unknown
51.3
2667
Female, age 75, unknown
51.2
1817
Female, age 42, unknown
45.2
1816
Male, age 51, unknown
44.3
1944
Female, age 72, unknown
44.2
Red nucleus nTPM: 58.5
2823
Male, age 76, right hemisphere
67.7
2769
Male, age 72, unknown
63.5
2227
Male, age 72, unknown
61.9
2503
Female, age 72, unknown
61.2
2588
Male, age 74, left hemisphere
61.1
1904
Male, age 53, unknown
60.7
2584
Male, age 75, left hemisphere
59.6
1865
Male, age 51, unknown
57.1
2785
Male, age 18, unknown
56.2
2725
Female, age 75, unknown
54.5
1954
Female, age 42, unknown
50.1
1821
Female, age 72, unknown
48.5
Substantia nigra nTPM: 54.3
2583
Male, age 75, right hemisphere
72.1
2590
Female, age 75, unknown
69.9
2699
Male, age 18, unknown
63.1
2665
Male, age 74, both hemispheres
61.8
1851
Male, age 51, unknown
52.1
1941
Male, age 53, unknown
51.1
1916
Female, age 42, unknown
47.4
1889
Female, age 72, unknown
45.2
2409
Female, age 72, unknown
40.7
2241
Male, age 72, unknown
39.8
Superior colliculus nTPM: 56.0
2664
Male, age 75, both hemispheres
69.6
1913
Female, age 42, unknown
64.7
1995
Male, age 72, unknown
64.3
2587
Male, age 74, left hemisphere
56.6
1839
Male, age 51, unknown
54.9
2261
Male, age 18, unknown
54.3
2668
Female, age 75, unknown
51.4
2087
Female, age 72, unknown
48.6
1796
Male, age 53, unknown
48.4
1895
Male, age 76, right hemisphere
47.7
Ventral tegmental area nTPM: 51.3
2021
Male, age 53, unknown
60.2
1942
Male, age 51, unknown
56.2
1915
Female, age 42, unknown
51.2
2410
Female, age 72, unknown
48.5
2223
Female, age 72, unknown
46.7
2218
Male, age 76, both hemispheres
45.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
32.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 32.3
Samples: 139
Max nTPM: 57.2
Min nTPM: 16.2
Std nTPM: 7.6
Median nTPM: 31.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
57.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
56.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
53.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
51.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
49.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
47.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
47.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
46.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
44.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
44.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
43.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
43.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
42.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
42.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
42.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
41.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
41.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
41.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
40.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
40.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
40.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
39.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
39.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
39.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
39.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
39.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
38.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
38.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
37.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
37.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
37.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
37.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
37.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
36.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
36.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
36.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
36.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
35.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
35.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
35.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
35.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
35.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
35.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
35.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
35.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
34.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
34.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
34.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
34.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
34.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
34.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
34.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
33.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
33.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
33.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
32.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
32.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
32.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
32.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
32.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
32.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
32.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
32.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
32.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
32.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
32.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
32.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
32.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
32.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
31.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
31.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
31.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
31.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
30.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
30.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
30.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
30.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
30.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
30.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
30.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
30.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
30.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
30.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
29.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
29.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
29.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
29.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
29.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
29.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
29.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
28.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
28.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
28.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
28.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
28.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
27.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
27.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
27.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
27.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
27.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
27.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
27.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
27.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
27.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
26.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
26.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
26.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
26.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
26.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
26.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
25.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
25.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
25.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
25.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
25.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
25.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
25.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
25.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
25.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
25.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
25.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
24.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
24.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
24.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
23.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
23.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
23.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
22.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
22.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
21.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
21.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
21.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
21.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
20.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
20.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
19.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
17.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
17.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
16.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
6.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 6.2
Samples: 4
Max nTPM: 6.9
Min nTPM: 5.4
Sample A
Male
6.9
Sample B
Male
6.1
Sample C
Female
5.4
Sample D
Female
6.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.