PTPN1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.1 FPKM
GTEx:20.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA012542

 

Antibody CAB009329

 

Antibody CAB015217

 

Endothelial cells

Low   Medium   High  

Glandular cells

High   High   High  

Peripheral nerve/ganglion

Low   Low   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

15.1

overview Male, age 54
Sample 1
FPKM: 11.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 17.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.3
Samples: 149

Max RPKM: 37.7
Min RPKM: 11.7
Std RPKM: 3.8
Median RPKM: 19.9
GTEX-11WQK-2526-SM-5CVL8 37.7
GTEX-13X6I-2726-SM-5Q5ET 34.8
GTEX-148VJ-2426-SM-5NQ9Y 33.0
GTEX-11TT1-0926-SM-5GU5M 31.8
GTEX-14C5O-2626-SM-5RQI5 30.4
GTEX-13O1R-2426-SM-5KLZZ 27.8
GTEX-14E6C-2226-SM-5QGQG 27.5
GTEX-13O61-1526-SM-5KM3P 27.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.6
Samples: 196

Max RPKM: 85
Min RPKM: 12
Std RPKM: 6.3
Median RPKM: 19.3
GTEX-14C38-2626-SM-5RQI4 85.0
GTEX-13OVJ-1726-SM-5IJDZ 45.8
GTEX-QDVJ-1326-SM-48U1X 33.3
GTEX-11WQK-2126-SM-5EQME 33.2
GTEX-144GM-1226-SM-5LU52 32.8
GTEX-ZYVF-2826-SM-5GIDK 32.3
GTEX-ZY6K-1226-SM-5GZYL 30.3
GTEX-WEY5-1426-SM-4LMJ3 29.9
Show all