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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
258.8
nTPM
Monaco:
312.6
nTPM
Schmiedel:
88.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
258.8
HPA sample
nTPM
gdT-cell nTPM: 209.6
Samples: 6
Max nTPM: 255.0
Min nTPM: 168.0
P10809_1007
222.3
P10809_1022
230.9
P10809_1041
255.0
P10809_1060
168.0
P10809_1077
186.0
P10809_1098
195.6
MAIT T-cell nTPM: 225.4
Samples: 6
Max nTPM: 244.2
Min nTPM: 193.9
P10809_1006
233.7
P10809_1024
244.2
P10809_1043
209.9
P10809_1062
193.9
P10809_1083
238.1
P10809_1097
232.7
Memory CD4 T-cell nTPM: 156.2
Samples: 6
Max nTPM: 168.4
Min nTPM: 148.7
P10809_1014
156.1
P10809_1026
151.7
P10809_1045
160.3
P10809_1064
152.1
P10809_1086
168.4
P10809_1113
148.7
Memory CD8 T-cell nTPM: 194.1
Samples: 5
Max nTPM: 232.9
Min nTPM: 174.5
P10809_1012
178.0
P10809_1027
232.9
P10809_1046
174.5
P10809_1065
196.3
P10809_1111
188.9
Naive CD4 T-cell nTPM: 93.8
Samples: 6
Max nTPM: 111.1
Min nTPM: 81.2
P10809_1015
90.3
P10809_1030
96.8
P10809_1049
100.2
P10809_1068
83.1
P10809_1085
111.1
P10809_1112
81.2
Naive CD8 T-cell nTPM: 139.0
Samples: 6
Max nTPM: 194.5
Min nTPM: 105.7
P10809_1016
105.7
P10809_1031
119.0
P10809_1050
160.4
P10809_1069
147.6
P10809_1087
194.5
P10809_1110
106.9
T-reg nTPM: 258.8
Samples: 6
Max nTPM: 371.9
Min nTPM: 216.7
P10809_1018
216.7
P10809_1037
227.7
P10809_1056
238.6
P10809_1075
250.6
P10809_1094
371.9
P10809_1106
247.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
312.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 213.1
Samples: 4
Max nTPM: 292.5
Min nTPM: 164.5
RHH5202_R3573
292.5
RHH5230_R3602
164.7
RHH5259_R3631
164.5
RHH5288_R3660
230.8
Effector memory CD8 T-cell nTPM: 312.6
Samples: 4
Max nTPM: 456.6
Min nTPM: 207.5
RHH5203_R3574
456.6
RHH5231_R3603
295.5
RHH5260_R3632
207.5
RHH5289_R3661
290.7
MAIT T-cell nTPM: 287.0
Samples: 4
Max nTPM: 310.9
Min nTPM: 232.1
RHH5233_R3605
310.9
RHH5205_R3576
232.1
RHH5262_R3634
301.2
RHH5297_R3663
303.9
Memory CD4 T-cell TFH nTPM: 248.0
Samples: 4
Max nTPM: 327.4
Min nTPM: 209.7
RHH5300_R3666
227.1
RHH5236_R3608
327.4
RHH5265_R3637
227.8
RHH5208_R3579
209.7
Memory CD4 T-cell Th1 nTPM: 187.5
Samples: 4
Max nTPM: 253.2
Min nTPM: 145.2
RHH5210_R3581
202.2
RHH5302_R3668
253.2
RHH5238_R3610
145.2
RHH5267_R3639
149.5
Memory CD4 T-cell Th1/Th17 nTPM: 218.8
Samples: 4
Max nTPM: 304.4
Min nTPM: 98.4
RHH5303_R3669
301.9
RHH5211_R3582
304.4
RHH5239_R3611
98.4
RHH5268_R3640
170.5
Memory CD4 T-cell Th17 nTPM: 195.9
Samples: 4
Max nTPM: 291.1
Min nTPM: 129.4
RHH5304_R3670
203.0
RHH5212_R3583
291.1
RHH5240_R3612
129.4
RHH5269_R3641
160.1
Memory CD4 T-cell Th2 nTPM: 210.9
Samples: 4
Max nTPM: 238.1
Min nTPM: 189.3
RHH5305_R3671
189.3
RHH5213_R3584
238.1
RHH5241_R3613
198.6
RHH5270_R3642
217.7
Naive CD4 T-cell nTPM: 134.7
Samples: 4
Max nTPM: 173.0
Min nTPM: 107.7
RHH5306_R3672
145.5
RHH5214_R3585
173.0
RHH5242_R3614
107.7
RHH5271_R3643
112.4
Naive CD8 T-cell nTPM: 131.5
Samples: 4
Max nTPM: 184.5
Min nTPM: 48.1
RHH5201_R3572
175.7
RHH5229_R3601
48.1
RHH5258_R3630
184.5
RHH5287_R3659
117.5
Non-Vd2 gdTCR nTPM: 282.7
Samples: 4
Max nTPM: 336.8
Min nTPM: 181.2
RHH5235_R3607
181.2
RHH5264_R3636
325.8
RHH5207_R3578
336.8
RHH5299_R3665
287.0
T-reg nTPM: 227.1
Samples: 4
Max nTPM: 324.7
Min nTPM: 184.6
RHH5301_R3667
204.8
RHH5237_R3609
324.7
RHH5266_R3638
194.4
RHH5209_R3580
184.6
Terminal effector memory CD4 T-cell nTPM: 186.1
Samples: 2
Max nTPM: 237.4
Min nTPM: 134.7
RHH5243_R3615
134.7
RHH5272_R3644
237.4
Terminal effector memory CD8 T-cell nTPM: 278.2
Samples: 4
Max nTPM: 380.0
Min nTPM: 199.9
RHH5232_R3604
237.6
RHH5204_R3575
380.0
RHH5261_R3633
199.9
RHH5296_R3662
295.1
Vd2 gdTCR nTPM: 289.2
Samples: 4
Max nTPM: 385.3
Min nTPM: 228.1
RHH5234_R3606
292.1
RHH5206_R3577
385.3
RHH5263_R3635
228.1
RHH5298_R3664
251.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.