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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
802.7
nTPM
Monaco:
901.5
nTPM
Schmiedel:
689.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
802.7
HPA sample
nTPM
gdT-cell nTPM: 299.2
Samples: 6
Max nTPM: 339.8
Min nTPM: 241.9
P10809_1007
241.9
P10809_1022
307.2
P10809_1041
339.8
P10809_1060
328.6
P10809_1077
308.4
P10809_1098
269.5
MAIT T-cell nTPM: 290.3
Samples: 6
Max nTPM: 328.4
Min nTPM: 240.6
P10809_1006
240.6
P10809_1024
328.4
P10809_1043
296.4
P10809_1062
317.2
P10809_1083
301.3
P10809_1097
258.0
Memory CD4 T-cell nTPM: 556.2
Samples: 6
Max nTPM: 637.3
Min nTPM: 451.1
P10809_1014
486.1
P10809_1026
596.4
P10809_1045
637.3
P10809_1064
534.3
P10809_1086
451.1
P10809_1113
631.9
Memory CD8 T-cell nTPM: 386.3
Samples: 5
Max nTPM: 397.5
Min nTPM: 377.3
P10809_1012
397.5
P10809_1027
377.3
P10809_1046
380.2
P10809_1065
386.3
P10809_1111
390.4
Naive CD4 T-cell nTPM: 282.2
Samples: 6
Max nTPM: 333.8
Min nTPM: 233.9
P10809_1015
233.9
P10809_1030
282.9
P10809_1049
333.8
P10809_1068
253.2
P10809_1085
283.9
P10809_1112
305.5
Naive CD8 T-cell nTPM: 275.5
Samples: 6
Max nTPM: 329.3
Min nTPM: 222.2
P10809_1016
222.2
P10809_1031
329.3
P10809_1050
246.7
P10809_1069
315.2
P10809_1087
294.8
P10809_1110
244.5
T-reg nTPM: 802.7
Samples: 6
Max nTPM: 1015.5
Min nTPM: 664.7
P10809_1018
664.7
P10809_1037
793.7
P10809_1056
881.1
P10809_1075
691.7
P10809_1094
769.5
P10809_1106
1015.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
901.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 623.1
Samples: 4
Max nTPM: 832.9
Min nTPM: 478.2
RHH5202_R3573
658.9
RHH5230_R3602
522.2
RHH5259_R3631
478.2
RHH5288_R3660
832.9
Effector memory CD8 T-cell nTPM: 454.3
Samples: 4
Max nTPM: 517.2
Min nTPM: 398.3
RHH5203_R3574
502.4
RHH5231_R3603
517.2
RHH5260_R3632
399.4
RHH5289_R3661
398.3
MAIT T-cell nTPM: 356.4
Samples: 4
Max nTPM: 411.9
Min nTPM: 251.8
RHH5233_R3605
411.9
RHH5205_R3576
251.8
RHH5262_R3634
352.5
RHH5297_R3663
409.3
Memory CD4 T-cell TFH nTPM: 856.5
Samples: 4
Max nTPM: 1025.2
Min nTPM: 711.9
RHH5300_R3666
828.1
RHH5236_R3608
1025.2
RHH5265_R3637
711.9
RHH5208_R3579
860.7
Memory CD4 T-cell Th1 nTPM: 655.2
Samples: 4
Max nTPM: 942.4
Min nTPM: 524.2
RHH5210_R3581
562.7
RHH5302_R3668
942.4
RHH5238_R3610
591.3
RHH5267_R3639
524.2
Memory CD4 T-cell Th1/Th17 nTPM: 657.0
Samples: 4
Max nTPM: 881.3
Min nTPM: 451.3
RHH5303_R3669
881.3
RHH5211_R3582
757.3
RHH5239_R3611
451.3
RHH5268_R3640
538.0
Memory CD4 T-cell Th17 nTPM: 637.1
Samples: 4
Max nTPM: 826.7
Min nTPM: 543.8
RHH5304_R3670
570.3
RHH5212_R3583
826.7
RHH5240_R3612
607.7
RHH5269_R3641
543.8
Memory CD4 T-cell Th2 nTPM: 901.5
Samples: 4
Max nTPM: 1143.2
Min nTPM: 757.0
RHH5305_R3671
915.7
RHH5213_R3584
790.0
RHH5241_R3613
1143.2
RHH5270_R3642
757.0
Naive CD4 T-cell nTPM: 450.3
Samples: 4
Max nTPM: 503.4
Min nTPM: 366.2
RHH5306_R3672
462.9
RHH5214_R3585
503.4
RHH5242_R3614
468.8
RHH5271_R3643
366.2
Naive CD8 T-cell nTPM: 323.8
Samples: 4
Max nTPM: 383.6
Min nTPM: 252.1
RHH5201_R3572
364.1
RHH5229_R3601
252.1
RHH5258_R3630
383.6
RHH5287_R3659
295.3
Non-Vd2 gdTCR nTPM: 405.4
Samples: 4
Max nTPM: 504.9
Min nTPM: 328.6
RHH5235_R3607
382.6
RHH5264_R3636
405.5
RHH5207_R3578
328.6
RHH5299_R3665
504.9
T-reg nTPM: 643.3
Samples: 4
Max nTPM: 839.3
Min nTPM: 470.7
RHH5301_R3667
839.3
RHH5237_R3609
741.5
RHH5266_R3638
470.7
RHH5209_R3580
521.7
Terminal effector memory CD4 T-cell nTPM: 502.1
Samples: 2
Max nTPM: 667.5
Min nTPM: 336.6
RHH5243_R3615
336.6
RHH5272_R3644
667.5
Terminal effector memory CD8 T-cell nTPM: 428.6
Samples: 4
Max nTPM: 571.0
Min nTPM: 315.3
RHH5232_R3604
368.6
RHH5204_R3575
571.0
RHH5261_R3633
315.3
RHH5296_R3662
459.5
Vd2 gdTCR nTPM: 449.3
Samples: 4
Max nTPM: 522.3
Min nTPM: 315.1
RHH5234_R3606
465.4
RHH5206_R3577
494.4
RHH5263_R3635
315.1
RHH5298_R3664
522.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.