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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
14505.4
nTPM
HPA Brain:
17965.5
nTPM
GTEx:
14505.4
nTPM
Pig:
10435.5
nTPM
Mouse:
5223.5
nTPM
Allen mouse:
22.5
Expression energy
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
17965.5
Sample id
Sample description
nTPM
Hippocampus nTPM: 17850.0
2621
Female, age 67, right hemisphere
30483.5
2529
Female, age 94, left hemisphere
19905.0
1855
Male, age 76, left hemisphere
17772.6
2148
Female, age 91, left hemisphere
17541.6
1911
Female, age 85, right hemisphere
13202.5
1898
Male, age 80, left hemisphere
8194.8
Dentate gyrus nTPM: 16212.9
2531
Female, age 67, both hemispheres
27416.0
2530
Female, age 94, left hemisphere
27159.6
2246
Female, age 85, both hemispheres
18179.4
2010
Male, age 76, both hemispheres
9640.8
2528
Male, age 74, both hemispheres
8207.0
1927
Female, age 91, both hemispheres
6674.4
Entorhinal gyrus nTPM: 13586.6
2686
Male, age 75, right hemisphere
26679.2
2613
Female, age 94, left hemisphere
18847.2
2117
Female, age 91, right hemisphere
11128.6
1938
Female, age 85, left hemisphere
10015.9
2764
Male, age 80, right hemisphere
7510.9
1787
Male, age 76, left hemisphere
7337.9
Hippocampus, CA1 nTPM: 10840.2
2527
Male, age 74, both hemispheres
16070.2
2045
Male, age 76, both hemispheres
11754.9
1873
Female, age 85, both hemispheres
10865.5
2749
Male, age 80, left hemisphere
9344.0
2082
Female, age 91, right hemisphere
6166.4
Hippocampus, CA2 nTPM: 10738.7
2437
Female, age 94, left hemisphere
21490.5
1892
Male, age 76, both hemispheres
11181.6
1940
Female, age 85, left hemisphere
10764.0
2113
Female, age 91, right hemisphere
9162.8
2249
Male, age 74, both hemispheres
5918.4
1963
Male, age 80, left hemisphere
5914.9
Hippocampus, CA3 nTPM: 17965.5
2861
Female, age 67, both hemispheres
51529.3
2620
Female, age 94, left hemisphere
15159.8
2137
Male, age 80, left hemisphere
11424.9
1867
Male, age 76, both hemispheres
11063.2
1891
Female, age 85, both hemispheres
9579.9
2436
Male, age 74, both hemispheres
9035.9
Parahippocampal cortex nTPM: 15965.2
2622
Female, age 67, right hemisphere
27895.2
2245
Female, age 91, both hemispheres
27427.7
2692
Male, age 74, both hemispheres
22983.3
2532
Female, age 72, left hemisphere
19826.9
2018
Male, age 76, both hemispheres
13207.5
2693
Female, age 94, both hemispheres
13123.2
2250
Female, age 67, right hemisphere
11696.4
1933
Female, age 85, both hemispheres
9121.2
1850
Male, age 80, both hemispheres
7940.4
1990
Female, age 91, right hemisphere
6430.2
Perirhinal gyrus nTPM: 7523.0
2848
Male, age 76, right hemisphere
10769.2
2521
Female, age 94, right hemisphere
8450.9
1841
Female, age 85, right hemisphere
7747.3
1794
Male, age 80, right hemisphere
5333.1
1847
Female, age 91, left hemisphere
5314.4
Subiculum nTPM: 13754.5
2438
Female, age 94, left hemisphere
27272.8
2619
Male, age 74, both hemispheres
17674.3
2042
Male, age 76, both hemispheres
13425.6
1901
Male, age 80, both hemispheres
10020.3
1977
Female, age 85, both hemispheres
8357.6
2729
Female, age 91, right hemisphere
5776.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
14505.4
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 14505.4
Samples: 197
Max nTPM: 108890.9
Min nTPM: 1910.4
Std nTPM: 13370.5
Median nTPM: 9948.8
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
5223.5
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 5223.5
Samples: 4
Max nTPM: 5569.5
Min nTPM: 4656.6
Sample A
Male
5569.5
Sample B
Male
4656.6
Sample C
Female
5458.8
Sample D
Female
5209.2
Hippocampal formation nTPM: 4004.0
Samples: 4
Max nTPM: 4959.8
Min nTPM: 3458.5
Sample A
Male
4959.8
Sample B
Male
3724.8
Sample C
Female
3458.5
Sample D
Female
3872.9
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.