HLA-DRA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:427.4 FPKM
GTEx:87.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA050162

 

Antibody HPA053176

 

Antibody CAB002798

 

Antibody CAB015402

 

Endothelial cells

Low   Low   Medium   Medium  

Glandular cells

Not detected   Not detected   Not detected   Low  

Peripheral nerve/ganglion

Not detected   Not detected   Not available   Not available  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

427.4

overview Male, age 54
Sample 1
FPKM: 274.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 588.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 242.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 66.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 925.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 322.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 572.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

87.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 66.9
Samples: 149

Max RPKM: 211.8
Min RPKM: 17.8
Std RPKM: 36
Median RPKM: 60.9
GTEX-13SLW-2826-SM-5Q5ES 211.8
GTEX-ZAB4-2426-SM-5HL8A 203.9
GTEX-11PRG-2026-SM-5GU5F 196.0
GTEX-147GR-2826-SM-5RQK8 183.6
GTEX-Y114-1626-SM-4TT7I 153.7
GTEX-13X6I-2726-SM-5Q5ET 140.4
GTEX-12ZZY-2726-SM-5EQ45 134.2
GTEX-ZAJG-2626-SM-5S2NU 130.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 107.3
Samples: 196

Max RPKM: 523.4
Min RPKM: 9.7
Std RPKM: 76.8
Median RPKM: 89
GTEX-13OVJ-1726-SM-5IJDZ 523.4
GTEX-Q2AH-1226-SM-48TZL 478.6
GTEX-144GM-1226-SM-5LU52 386.0
GTEX-13PL7-2526-SM-5IFGR 307.2
GTEX-XMK1-1726-SM-4B64Z 296.3
GTEX-117YW-1826-SM-5PNY5 278.4
GTEX-12C56-0626-SM-5EGGC 272.0
GTEX-R53T-1326-SM-48FCQ 265.4
Show all